RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 HGH1Q9BTY7 390 aa12.8□□□□□ -0.36
CNOT4-204ENST00000414802 PCOLCE2Q9UKZ9 415 aa12.8□□□□□ -0.36
CNOT4-204ENST00000414802 PLAGL1Q9UM63 463 aa12.8□□□□□ -0.36
CNOT4-204ENST00000414802 ASF1AQ9Y294 204 aa12.8□□□□□ -0.36
CNOT4-204ENST00000414802 CNOT1A5YKK6 2376 aaKnown RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 ARHGEF33A8MVX0 844 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 TRIM38O00635 465 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 NOBOXO60393 691 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 TGM1P22735 817 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 SLC19A1P41440 591 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 PRKG2Q13237 762 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 CSRP2Q16527 193 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 FAM83EQ2M2I3 478 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 AASDHQ4L235 1098 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 LRRC8EQ6NSJ5 796 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 LVRNQ6Q4G3 990 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 ABRAXAS1Q6UWZ7 409 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 WASH2PQ6VEQ5 465 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 NEK10Q6ZWH5 1172 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 BANPQ8N9N5 519 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 DLG3Q92796 817 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 CXorf40BQ96DE9 158 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 ATP6V1G3Q96LB4 118 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 FOPNLQ96NB1 174 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 NMRAL1Q9HBL8 299 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 WASH6PQ9NQA3 447 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 UTP6Q9NYH9 597 aaKnown RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 ZNF624Q9P2J8 865 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 TDRKHQ9Y2W6 561 aaKnown RBP12.79□□□□□ -0.36
CNOT4-204ENST00000414802 CSNK1G3Q9Y6M4 447 aa12.79□□□□□ -0.36
CNOT4-204ENST00000414802 COL5A1P20908 1838 aaPredicted RBP12.78□□□□□ -0.36
CNOT4-204ENST00000414802 PROB1E7EW31 1015 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 TK2O00142 265 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 CDX4O14627 284 aaPredicted RBP12.78□□□□□ -0.36
CNOT4-204ENST00000414802 GDF9O60383 454 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 LRP3O75074 770 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 MATN4O95460 622 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 ATP6V0D1P61421 351 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 PHKG1Q16816 387 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 TECRLQ5HYJ1 363 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 C6orf132Q5T0Z8 1188 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 IYDQ6PHW0 289 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 UNC5DQ6UXZ4 953 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 CCDC91Q7Z6B0 441 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 ZNF761Q86XN6 746 aaPredicted RBP12.78□□□□□ -0.36
CNOT4-204ENST00000414802 TRIM48Q8IWZ4 208 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 SLC35F3Q8IY50 421 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 EID2Q8N6I1 236 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 ASB11Q8WXH4 323 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 PDLIM5Q96HC4 596 aaKnown RBP12.78□□□□□ -0.36
CNOT4-204ENST00000414802 FERD3LQ96RJ6 166 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 TMEM9BQ9NQ34 198 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 NLGN3Q9NZ94 848 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 TMEM216Q9P0N5 145 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 SENP1Q9P0U3 644 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 XPR1Q9UBH6 696 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 EMCNQ9ULC0 261 aa12.78□□□□□ -0.36
CNOT4-204ENST00000414802 MDC1Q14676 2089 aaKnown RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 NEMP2A6NFY4 417 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 NCF1BA6NI72 391 aaPredicted RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 NCF1CA8MVU1 366 aaPredicted RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 H3BQF6 201 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 ATP8B1O43520 1251 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 SIGLEC6O43699 453 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 GLRA3O75311 464 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 C1orf105O95561 183 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 CATP04040 527 aaKnown RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 COL6A2P12110 1019 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 NCF1P14598 390 aaPredicted RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 SLC26A3P40879 764 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 UBE2IP63279 158 aaKnown RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 KRT33BQ14525 404 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 TSNAXIP1Q2TAA8 658 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 KLC3Q6P597 504 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 FRA10AC1Q70Z53 315 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 ISCA2Q86U28 154 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 RASGRP3Q8IV61 690 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 CNPY4Q8N129 248 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 SFRP1Q8N474 314 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 LMNTD1Q8N9Z9 388 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 OR4C6Q8NH72 309 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 MAPK15Q8TD08 544 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 KIAA1191Q96A73 305 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 DNAAF2Q9NVR5 837 aaKnown RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 MKS1Q9NXB0 559 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 CPSF2Q9P2I0 782 aaKnown RBP12.77□□□□□ -0.36
CNOT4-204ENST00000414802 SLC17A7Q9P2U7 560 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 CPNE7Q9UBL6 633 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 RNF112Q9ULX5 631 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 PDE10AQ9Y233 779 aa12.77□□□□□ -0.36
CNOT4-204ENST00000414802 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.37
CNOT4-204ENST00000414802 A0A0G2JNG1 304 aa12.77□□□□□ -0.37
CNOT4-204ENST00000414802 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms