RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 MMP12P39900 470 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 GRIA3P42263 894 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 RPL38P63173 70 aaKnown RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 FOXM1Q08050 763 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 MED21Q13503 144 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 GAB4Q2WGN9 574 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 RARS2Q5T160 578 aaKnown RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 ETFBKMTQ8IXQ9 262 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 TRAM1L1Q8N609 369 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 ICA1LQ8NDH6 482 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 LRTOMTQ8WZ04 291 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 TMEM74Q96NL1 305 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 GBP5Q96PP8 586 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 TSC22D3Q99576 134 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 CERS4Q9HA82 394 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 DKK3Q9UBP4 350 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 LEF1Q9UJU2 399 aaPredicted RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 MPC1LP0DKB6 136 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 HLA-EP13747 358 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 GGT5P36269 586 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 DGKQP52824 942 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 GPM6BQ13491 265 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 PLEKHS1Q5SXH7 462 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 NAIF1Q69YI7 327 aaPredicted RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 LIPIQ6XZB0 460 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 DDHD1Q8NEL9 900 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 ELMO1Q92556 727 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 PYCR2Q96C36 320 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 MTFMTQ96DP5 389 aaKnown RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 DUS3LQ96G46 650 aaKnown RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 SEMA6AQ9H2E6 1030 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 SLC32A1Q9H598 525 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 ZNF490Q9ULM2 529 aaPredicted RBP15.03■□□□□ -0
LRCH3-202ENST00000414675 USP22Q9UPT9 525 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 CROCCQ5TZA2 2017 aa15.03■□□□□ -0
LRCH3-202ENST00000414675 GFYI3L273 518 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 TXNDC9O14530 226 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 C8GP07360 202 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 POU2F2P09086 479 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 XPAP23025 273 aaPredicted RBP15.02□□□□□ -0.01
LRCH3-202ENST00000414675 CTSCP53634 463 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 PRKG2Q13237 762 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 PTGR1Q14914 329 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 METTL2BQ6P1Q9 378 aaKnown RBP15.02□□□□□ -0.01
LRCH3-202ENST00000414675 NEK5Q6P3R8 708 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 TMEM126BQ8IUX1 230 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 RGL4Q8IZJ4 473 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 LILRA3Q8N6C8 439 aaPredicted RBP15.02□□□□□ -0.01
LRCH3-202ENST00000414675 VN1R2Q8NFZ6 395 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 FOXJ1Q92949 421 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 USP7Q93009 1102 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 PPP3R2Q96LZ3 170 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 WRAP53Q9BUR4 548 aaKnown RBP15.02□□□□□ -0.01
LRCH3-202ENST00000414675 TRIM54Q9BYV2 358 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 NFKBIL1Q9UBC1 381 aaPredicted RBP15.02□□□□□ -0.01
LRCH3-202ENST00000414675 CNOT6Q9ULM6 557 aaKnown RBP15.02□□□□□ -0.01
LRCH3-202ENST00000414675 SLC8A2Q9UPR5 921 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 SLC27A6Q9Y2P4 619 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 REV3LO60673 3130 aa15.02□□□□□ -0.01
LRCH3-202ENST00000414675 ANTXRLA6NF34 631 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 KPNA3O00505 521 aaPredicted RBP15.01□□□□□ -0.01
LRCH3-202ENST00000414675 PRAMEF4O60810 478 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 ULK1O75385 1050 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 ADH1CP00326 375 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 ASLP04424 464 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 MSH3P20585 1137 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 SLC7A1P30825 629 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 SLC6A12P48065 614 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 GSK3BP49841 420 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 VASPP50552 380 aaPredicted RBP15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CDKL1Q00532 357 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 FOLH1Q04609 750 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 KIAA0040Q15053 153 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CPSF6Q16630 551 aaKnown RBP eCLIP15.01□□□□□ -0.01
LRCH3-202ENST00000414675 PTCHD3Q3KNS1 767 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CDKL4Q5MAI5 379 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 C9orf50Q5SZB4 431 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 PRAMEF9Q5VWM5 478 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 HMBOX1Q6NT76 420 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 TRIM46Q7Z4K8 759 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 SPPL2CQ8IUH8 684 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 NPAS3Q8IXF0 933 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CHCHD4Q8N4Q1 142 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 RASGEF1AQ8N9B8 481 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 ADCY4Q8NFM4 1077 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 OR2T34Q8NGX1 318 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 OR2T3Q8NH03 318 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 WFIKKN2Q8TEU8 576 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CANT1Q8WVQ1 401 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 BTN2A2Q8WVV5 523 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 ZSCAN5AQ9BUG6 496 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 MUC22E2RYF6 1773 aaPredicted RBP15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CFAP99D6REC4 459 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 PLK4O00444 970 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 RGS14O43566 566 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 TSPAN6O43657 245 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 WDR47O94967 919 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 CLDN9O95484 217 aa15.01□□□□□ -0.01
LRCH3-202ENST00000414675 ENO2P09104 434 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms