RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MEIS2O14770 477 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 SDC2P34741 201 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 SRYQ05066 204 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 PRDM12Q9H4Q4 367 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 CTPS2Q9NRF8 586 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 IFT172Q9UG01 1749 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 ASTN1O14525 1302 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 A0A1W2PPL8 197 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 B4GALT2O60909 372 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 PSMD10O75832 226 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 POP4O95707 220 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 CYP1A2P05177 515 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 ANXA4P09525 319 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 MPIP34949 423 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 FN3KQ9H479 309 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 SNX15Q9NRS6 342 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 FBXO9Q9UK97 447 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 DGKBQ9Y6T7 804 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 CLUHO75153 1309 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 DDX3YO15523 660 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 COX4I1P13073 169 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 RPL10P27635 214 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 AUTS2Q8WXX7 1259 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 PCDHB1Q9Y5F3 818 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 NRIP1P48552 1158 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 HEPACAMQ14CZ8 416 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF792Q3KQV3 632 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 TCEANCQ8N8B7 351 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 STYXQ8WUJ0 223 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 EZH1Q92800 747 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 PCDHGC3Q9UN70 934 aa11.06□□□□□ -0.64
PRPF40A-202ENST00000410080 hCG_1807616A0A1W2PRN6 198 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SNAP91O60641 907 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 NRLP54845 237 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 RPL6Q02878 288 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SCGB2B2Q4G0G5 96 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 EIPR1Q53HC9 387 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 CLEC12AQ5QGZ9 265 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 IDNKQ5T6J7 187 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ADNP2Q6IQ32 1131 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ANO7Q6IWH7 933 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 THEM6Q8WUY1 208 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 HBEGFQ99075 208 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ORAI3Q9BRQ5 295 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PCBD2Q9H0N5 130 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 MMADHCQ9H3L0 296 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SDHAF3Q9NRP4 125 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 MIOSQ9NXC5 875 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SNX10Q9Y5X0 201 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ACP5P13686 325 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SNTA1Q13424 505 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PRAMEF17Q5VTA0 474 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 TRAPPC6BQ86SZ2 158 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 CCDC36Q8IYA8 594 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 LRRN4CLQ8ND94 238 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 THAP3Q8WTV1 239 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 KLHL6Q8WZ60 621 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF471Q9BX82 626 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ARL5AQ9Y689 179 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 TNFRSF11BO00300 401 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 CDC7O00311 574 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ITGB1P05556 798 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PPIBP23284 216 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 RGS19P49795 217 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 MLLT1Q03111 559 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PDGFRLQ15198 375 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 KREMEN2Q8NCW0 462 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 OR5B17Q8NGF7 314 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 DLG3Q92796 817 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 RNF157Q96PX1 679 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 GTF2IRD1Q9UHL9 959 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 A0A0U1RQJ8 604 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SMIM35A0A1B0GVV1 85 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 RPP14O95059 124 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ALPPP05187 535 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 GALK2Q01415 458 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 IL17AQ16552 155 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 TMPPEQ6ZT21 453 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 AMIGO2Q86SJ2 522 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ALYREFQ86V81 257 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 NUSAP1Q9BXS6 441 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 HEMK1Q9Y5R4 338 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 FAM234BA2RU67 622 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SHBGP04278 402 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 MAGEA2P43356 314 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 IST1P53990 364 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PRKCZQ05513 592 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 OGFRL1Q5TC84 451 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SPATC1Q76KD6 591 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 LAS2Q8IYD9 372 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 INO80EQ8NBZ0 244 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 HTRA1Q92743 480 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SERTAD3Q9UJW9 196 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 TIMM22Q9Y584 194 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 TDRD6O60522 2096 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms