RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 GID8Q9NWU2 228 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 UTP6Q9NYH9 597 aaKnown RBP14.04□□□□□ -0.16
MINDY4-202ENST00000409881 CCDC167Q9P0B6 97 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 VTI1BQ9UEU0 232 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 AURKCQ9UQB9 309 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 CKAP5Q14008 2032 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 C1orf232A0A0U1RR37 186 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 AP3B1O00203 1094 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 PHGDHO43175 533 aaKnown RBP14.04□□□□□ -0.16
MINDY4-202ENST00000409881 OXSR1O95747 527 aaPredicted RBP14.04□□□□□ -0.16
MINDY4-202ENST00000409881 SLC4A1P02730 911 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 ALPIP09923 528 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 NME5P56597 212 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 KCNC4Q03721 635 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 MERTKQ12866 999 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 SPANXN3Q5MJ09 141 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 BRAT1Q6PJG6 821 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 TMEM92Q6UXU6 159 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 EPHX4Q8IUS5 362 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 TMEM151AQ8N4L1 468 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 ITPKCQ96DU7 683 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 IL22Q9GZX6 179 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 SLC6A17Q9H1V8 727 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 DYRK4Q9NR20 520 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 NCKIPSDQ9NZQ3 722 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 ITGB1BP2Q9UKP3 347 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 ERGIC3Q9Y282 383 aa14.04□□□□□ -0.16
MINDY4-202ENST00000409881 C16orf96A6NNT2 1141 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 PLK4O00444 970 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 XPAP23025 273 aaPredicted RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 NPY2RP49146 381 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SEMG2Q02383 582 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 TRAP1Q12931 704 aaKnown RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 NFATC3Q12968 1075 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 FZD5Q13467 585 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 AGKQ53H12 422 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 FAM46CQ5VWP2 391 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 ZNF776Q68DI1 518 aaPredicted RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 PARS2Q7L3T8 475 aaKnown RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 PJA1Q8NG27 643 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 ARRDC3Q96B67 414 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 PPP1R16AQ96I34 528 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 NAT9Q9BTE0 207 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 MKRN2Q9H000 416 aaKnown RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SPAG4Q9NPE6 437 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SPO11Q9Y5K1 396 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 VCANP13611 3396 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 TCRBV21S2A2A0A5A6 115 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 CCDC78A2IDD5 438 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 A8MX80 341 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SDHDO14521 159 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 MID1O15344 667 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 ESRRBO95718 433 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 BMP2P12643 396 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 ATP6V1B2P21281 511 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 ITGB7P26010 798 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 MAP4P27816 1152 aaKnown RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SIGLEC14Q08ET2 396 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 CST6Q15828 149 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SLC2A7Q6PXP3 512 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 CCDC80Q76M96 950 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 ERMP1Q7Z2K6 904 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 DHFR2Q86XF0 187 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 KCTD4Q8WVF5 259 aa14.03□□□□□ -0.16
MINDY4-202ENST00000409881 MRPL40Q9NQ50 206 aaKnown RBP14.03□□□□□ -0.16
MINDY4-202ENST00000409881 A0A0J9YYE9 177 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 A0A0U1RQS6 177 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 RNF103-CHMP3A0A140T963 221 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 A0A1W2PQ67 120 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 TSPAN11A1L157 253 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 TRBC1P01850 177 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 MATN1P21941 496 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 HK2P52789 917 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 RPS14P62263 151 aaKnown RBP14.02□□□□□ -0.16
MINDY4-202ENST00000409881 POLR2LP62875 67 aaKnown RBP14.02□□□□□ -0.16
MINDY4-202ENST00000409881 STX5Q13190 355 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 GAS6Q14393 721 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 CRY1Q16526 586 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 UGP2Q16851 508 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 FAM219BQ5XKK7 198 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 SPATA6LQ8N4H0 392 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 PPHLN1Q8NEY8 458 aaKnown RBP14.02□□□□□ -0.16
MINDY4-202ENST00000409881 EDAQ92838 391 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 TAMM41Q96BW9 452 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 MFSD3Q96ES6 412 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 OMDQ99983 421 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 CCDC68Q9H2F9 335 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 SOX17Q9H6I2 414 aaPredicted RBP14.02□□□□□ -0.16
MINDY4-202ENST00000409881 FBRSQ9HAH7 460 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 DKK3Q9UBP4 350 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 CD300AQ9UGN4 299 aa14.02□□□□□ -0.16
MINDY4-202ENST00000409881 RUVBL2Q9Y230 463 aaKnown RBP14.02□□□□□ -0.16
MINDY4-202ENST00000409881 RBMX2Q9Y388 322 aaKnown RBP14.02□□□□□ -0.16
MINDY4-202ENST00000409881 UPK3BL1B0FP48 263 aa14.02□□□□□ -0.17
MINDY4-202ENST00000409881 UPK3BL2E5RIL1 263 aa14.02□□□□□ -0.17
MINDY4-202ENST00000409881 NOL3O60936 208 aaKnown RBP14.02□□□□□ -0.17
MINDY4-202ENST00000409881 PDGFBP01127 241 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms