RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TOMM20Q15388 145 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 DEFB110Q30KQ9 67 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 IER5LQ5T953 404 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 SYCE2Q6PIF2 218 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 AGTRAPQ6RW13 159 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 C2CD4AQ8NCU7 369 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 ATOH1Q92858 354 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 OR52B2Q96RD2 323 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 OR52E6Q96RD3 313 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 PKMYT1Q99640 499 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 SLC39A3Q9BRY0 314 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 MKRN2Q9H000 416 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 PRSS16Q9NQE7 514 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 PRSS21Q9Y6M0 314 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 SPTBP11277 2137 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 SLC35E2BP0CK96 405 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ZNF37AP17032 561 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 ZNF30P17039 623 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ATP6V1B2P21281 511 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CXCL12P48061 93 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 DEFB133Q30KQ1 61 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 LSM12Q3MHD2 195 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 DNAL1Q4LDG9 190 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CCNYL2Q5T2Q4 361 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ZDHHC20Q5W0Z9 365 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ANKRD26P1Q6NSI1 321 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 VN1R2Q8NFZ6 395 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 OR2T3Q8NH03 318 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 PYDC1Q8WXC3 89 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ARRDC3Q96B67 414 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 PRDM8Q9NQV8 689 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 TM7SF3Q9NS93 570 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CROTQ9UKG9 612 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CNOT6Q9ULM6 557 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 COLEC10Q9Y6Z7 277 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 K7ESM1 405 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ADH1BP00325 375 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 LMNAP02545 664 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 ANXA4P09525 319 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 GNAZP19086 355 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ARHGDIAP52565 204 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 C2orf80Q0P641 193 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 OLIG1Q8TAK6 271 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CCDC138Q96M89 665 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 NECAB3Q96P71 396 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 CDX2Q99626 313 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 ING2Q9H160 280 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 APOBEC3BQ9UH17 382 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 BRCA1P38398 1863 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 C9P02748 559 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 AP2B1P63010 937 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 MRPS22P82650 360 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 ZNF33AQ06730 810 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ZNF77Q15935 545 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 BHLHA9Q7RTU4 235 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 CPXM2Q8N436 756 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 FITM2Q8N6M3 262 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 OR13J1Q8NGT2 312 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 ZNF707Q96C28 371 aaPredicted RBP11.16□□□□□ -0.62
SNX13-202ENST00000409604 LRTM1Q9HBL6 345 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 SLC40A1Q9NP59 571 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 HRASLS2Q9NWW9 162 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 MOCS1Q9NZB8 636 aa11.16□□□□□ -0.62
SNX13-202ENST00000409604 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 RTCAO00442 366 aaKnown RBP11.15□□□□□ -0.62
SNX13-202ENST00000409604 IFNA8P32881 189 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 ARRB1P49407 418 aaPredicted RBP11.15□□□□□ -0.62
SNX13-202ENST00000409604 C1orf53Q5VUE5 145 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 ZNF783Q6ZMS7 281 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 Q6ZSR6 202 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 OR52B6Q8NGF0 335 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 AIF1LQ9BQI0 150 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 YIPF4Q9BSR8 244 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 VTI1BQ9UEU0 232 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 LGALS13Q9UHV8 139 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 ENTPD4Q9Y227 616 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 ABCA7Q8IZY2 2146 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 SAC3D1A6NKF1 404 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 TNFP01375 233 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 C8orf89P0DMQ9 161 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 MAPK1P28482 360 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 DGKQP52824 942 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 HSPB3Q12988 150 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 TEAD4Q15561 434 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 PHKG1Q16816 387 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 POMZP3Q6PJE2 187 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 CYP2U1Q7Z449 544 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 GALNT10Q86SR1 603 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 TMEM150AQ86TG1 271 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 TRIM73Q86UV7 250 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 TMC8Q8IU68 726 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 OTUB1Q96FW1 271 aaPredicted RBP11.15□□□□□ -0.62
SNX13-202ENST00000409604 RNF145Q96MT1 663 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 BRINP2Q9C0B6 783 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 RERGLQ9H628 205 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 KCNK4Q9NYG8 393 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 ANGPTL2Q9UKU9 493 aa11.15□□□□□ -0.62
SNX13-202ENST00000409604 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 FEZF1A0PJY2 475 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms