RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 OR8J3Q8NGG0 315 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 PROX1Q92786 737 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 NACA2Q9H009 215 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 CATSPERBQ9H7T0 1116 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 POPDC3Q9HBV1 291 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 PNMA8BQ9ULN7 279 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-205ENST00000409455 PCDHB7Q9Y5E2 793 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 TET1Q8NFU7 2136 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 FAM172BPA6NC97 362 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 FGF10O15520 208 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-205ENST00000409455 IDH3BO43837 385 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 FTH1P02794 183 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 DCTP40126 519 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 GATMP50440 423 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 PPP1R8Q12972 351 aaKnown RBP15.17■□□□□ 0.02
LIMS2-205ENST00000409455 RBBP7Q16576 425 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 NKG7Q16617 165 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 PLEKHG6Q3KR16 790 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 ZNF404Q494X3 552 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 MFSD4BQ5TF39 518 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 B3GNT8Q7Z7M8 397 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 SYVN1Q86TM6 617 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 OR2T11Q8NH01 316 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 FAM162AQ96A26 154 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 ZNF583Q96ND8 569 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 CLSTN3Q9BQT9 956 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 SLC25A51Q9H1U9 297 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 MMP27Q9H306 513 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 NEU3Q9UQ49 428 aa15.17■□□□□ 0.02
LIMS2-205ENST00000409455 A6NL46 340 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 EFCAB9A8MZ26 197 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 MLYCDO95822 493 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ITGAMP11215 1152 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 JUNDP17535 347 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 POLR2EP19388 210 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 PAX3P23760 479 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 CYP2C18P33260 490 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 TRAF3Q13114 568 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 KRR1Q13601 381 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 PWP1Q13610 501 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ZC3H12BQ5HYM0 836 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 COLEC12Q5KU26 742 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 C6orf136Q5SQH8 315 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 DESI1Q6ICB0 168 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ZNF549Q6P9A3 640 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 SLC39A5Q6ZMH5 540 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 USP43Q70EL4 1123 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 HEATR4Q86WZ0 1026 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 DCP2Q8IU60 420 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 THEM5Q8N1Q8 247 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 KIAA1191Q96A73 305 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 SMARCD1Q96GM5 515 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 FAM193BQ96PV7 902 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 PKMYT1Q99640 499 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 OR2B2Q9GZK3 357 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 DUSP21Q9H596 190 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 MROH6A6NGR9 719 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 AGAP5A6NIR3 686 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 CENPBD1B2RD01 187 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ARNTLO00327 626 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 CCNKO75909 580 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 GLP2RO95838 553 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 RPS17P08708 135 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 PRDX3P30048 256 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 CD6P30203 668 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 CCR1P32246 355 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 CLK1P49759 484 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 SUOXP51687 545 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ITKQ08881 620 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 HIPK1Q86Z02 1210 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 RPL3LQ92901 407 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ACOX2Q99424 681 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 C6orf62Q9GZU0 229 aaPredicted RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 DCSTAMPQ9H295 470 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 ELAC1Q9H777 363 aaKnown RBP15.16■□□□□ 0.02
LIMS2-205ENST00000409455 WBP1LQ9NX94 342 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 UTS2RQ9UKP6 389 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 U3KQV3 271 aa15.16■□□□□ 0.02
LIMS2-205ENST00000409455 HHLA1C9JL84 531 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 RGS10O43665 173 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 GUCY1B2O75343 617 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 GOT2P00505 430 aaKnown RBP15.15■□□□□ 0.02
LIMS2-205ENST00000409455 COL6A1P12109 1028 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 CD36P16671 472 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 TYMPP19971 482 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 IGFBP5P24593 272 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 TUBA1BP68363 451 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 PLIN5Q00G26 463 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 RAB41Q5JT25 222 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 VARS2Q5ST30 1063 aaKnown RBP15.15■□□□□ 0.02
LIMS2-205ENST00000409455 MRNIPQ6NTE8 343 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 TUBA1AQ71U36 451 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 KIAA1958Q8N8K9 716 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 ZNF540Q8NDQ6 660 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 THUMPD3Q9BV44 507 aaKnown RBP15.15■□□□□ 0.02
LIMS2-205ENST00000409455 CEP44Q9C0F1 390 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 CSNK1G1Q9HCP0 422 aa15.15■□□□□ 0.02
LIMS2-205ENST00000409455 ATP13A1Q9HD20 1204 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms