RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 LILRA5A6NI73 299 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ZNF839A8K0R7 811 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 TM9SF1O15321 606 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 YY2O15391 372 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ZW10O43264 779 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ZBTB14O43829 449 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 KERAO60938 352 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 F7P08709 466 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ITGB6P18564 788 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 SAT1P21673 171 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 AK4P27144 223 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 PREPP48147 710 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 HNMTP50135 292 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 NAA20P61599 178 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 PPP1R3AQ16821 1122 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 TTC23LQ6PF05 361 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 CYHR1Q6ZMK1 362 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ZNF438Q7Z4V0 828 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 VRK3Q8IV63 474 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 CYP4X1Q8N118 509 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 NAGSQ8N159 534 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 TCAIMQ8N3R3 496 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 SLC25A45Q8N413 288 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 RAB42Q8N4Z0 105 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 BANPQ8N9N5 519 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 FAM46DQ8NEK8 389 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 CCL4L1Q8NHW4 92 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 MAPK15Q8TD08 544 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ZDHHC1Q8WTX9 485 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ANKRD49Q8WVL7 239 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ATL1Q8WXF7 558 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 NAT6Q93015 286 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 ATP6V1G3Q96LB4 118 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 C12orf66Q96MD2 445 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 MRPL57Q9BQC6 102 aaKnown RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 EDEM2Q9BV94 578 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 WWP1Q9H0M0 922 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 MRPL46Q9H2W6 279 aaKnown RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 TRIT1Q9H3H1 467 aaKnown RBP12.71□□□□□ -0.37
LIMS2-203ENST00000409254 KIR3DX1Q9H7L2 352 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 PARVBQ9HBI1 364 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 IGSF5Q9NSI5 407 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 PCMTD2Q9NV79 361 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 SPATA7Q9P0W8 599 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 GALPQ9UBC7 116 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 OARD1Q9Y530 152 aa12.71□□□□□ -0.37
LIMS2-203ENST00000409254 MDC1Q14676 2089 aaKnown RBP12.71□□□□□ -0.38
LIMS2-203ENST00000409254 MYO1CO00159 1063 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 COPEO14579 308 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 TYROBPO43914 113 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 C1orf105O95561 183 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 GIMD1P0DJR0 217 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 PYGBP11216 843 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 ERGP11308 486 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 TGM1P22735 817 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 MAP4P27816 1152 aaKnown RBP12.7□□□□□ -0.38
LIMS2-203ENST00000409254 PDHA2P29803 388 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 GPR3P46089 330 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 EPHA4P54764 986 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 NFKB2Q00653 900 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 CSHL1Q14406 222 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 ZNF460Q14592 562 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 RPE65Q16518 533 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 C14orf28Q4W4Y0 310 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 TECRLQ5HYJ1 363 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-203ENST00000409254 SBSNQ6UWP8 590 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 PIWIL4Q7Z3Z4 852 aaKnown RBP12.7□□□□□ -0.38
LIMS2-203ENST00000409254 ISCA2Q86U28 154 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
LIMS2-203ENST00000409254 HMGCLL1Q8TB92 370 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 MCOLN3Q8TDD5 553 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 RAD51AP1Q96B01 352 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 CXorf40BQ96DE9 158 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 CCDC126Q96EE4 140 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 GPR78Q96P69 363 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 TWSG1Q9GZX9 223 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
LIMS2-203ENST00000409254 VPS11Q9H270 941 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 PRDM8Q9NQV8 689 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 ASF1AQ9Y294 204 aa12.7□□□□□ -0.38
LIMS2-203ENST00000409254 KNTC1P50748 2209 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 A0A1W2PPM1 405 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 BTN3A1O00481 513 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 CDX4O14627 284 aaPredicted RBP12.69□□□□□ -0.38
LIMS2-203ENST00000409254 NOBOXO60393 691 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 IPO13O94829 963 aaKnown RBP12.69□□□□□ -0.38
LIMS2-203ENST00000409254 ZWINTO95229 277 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 FKBP9O95302 570 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 GLB1P16278 677 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 TFEBP19484 476 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 CCND1P24385 295 aa12.69□□□□□ -0.38
LIMS2-203ENST00000409254 RPL10P27635 214 aaKnown RBP12.69□□□□□ -0.38
LIMS2-203ENST00000409254 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
LIMS2-203ENST00000409254 SPEM2Q0P670 501 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms