RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CTBP1Q13363 440 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 ZNF789Q5FWF6 425 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CEACAM20Q6UY09 585 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 MAATS1Q7Z4T9 603 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 AMIGO1Q86WK6 493 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 DENND6AQ8IWF6 608 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 LMNTD2Q8IXW0 634 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 OR5K2Q8NHB8 316 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CFAP61Q8NHU2 1237 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 C16orf45Q96MC5 204 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 PWWP2AQ96N64 755 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 TEFMQ96QE5 360 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CD180Q99467 661 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 NRTNQ99748 197 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 NAT9Q9BTE0 207 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 LHX6Q9UPM6 363 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 SNX24Q9Y343 169 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 PCDHB11Q9Y5F2 797 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 CELSR3Q9NYQ7 3312 aa17.44■□□□□ 0.38
PDLIM2-206ENST00000409141 IGHV5-51A0A0C4DH38 117 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 GSAPA4D1B5 854 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 FAM187AA6NFU0 413 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 SLCO2B1O94956 709 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 SEC31AO94979 1220 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 TTC4O95801 387 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 LIPCP11150 499 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 PKMP14618 531 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 NELFEP18615 380 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 CHRM3P20309 590 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 ARL4DP49703 201 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 C2orf54Q08AI8 447 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 CRYMQ14894 314 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 TGIF1Q15583 401 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 HSP90AA5PQ58FG0 334 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 IGDCC3Q8IVU1 814 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 UNC5BQ8IZJ1 945 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 ZPBPQ9BS86 351 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 APMAPQ9HDC9 416 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 FBXO6Q9NRD1 293 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 SIDT1Q9NXL6 827 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 SEMA5BQ9P283 1151 aa17.43■□□□□ 0.38
PDLIM2-206ENST00000409141 TLCD2A6NGC4 264 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 STMND1H3BQB6 276 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 MATN2O00339 956 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 BTN3A3O00478 584 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 BTN3A1O00481 513 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 KDM1AO60341 852 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 NIPSNAP2O75323 286 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 SLC1A2P43004 574 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 RPL21P46778 160 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 KPNA2P52292 529 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 ARL4CP56559 192 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 SH3BP2P78314 561 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 HIF1AQ16665 826 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 SPANXN3Q5MJ09 141 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 HP1BP3Q5SSJ5 553 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 PLEKHS1Q5SXH7 462 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 KCNMB4Q86W47 210 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 SIDT2Q8NBJ9 832 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 SKA2Q8WVK7 121 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 FAM136AQ96C01 138 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 CRELD1Q96HD1 420 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 SLC41A2Q96JW4 573 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 OR6C1Q96RD1 312 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 FAM167BQ9BTA0 163 aa17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 IARS2Q9NSE4 1012 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-206ENST00000409141 LAMA5O15230 3695 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 E5RI56 91 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 NDC80O14777 642 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 RPN2P04844 631 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 F7P08709 466 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 SHMT2P34897 504 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 ELK3P41970 407 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 UCNP55089 124 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 UNC5DQ6UXZ4 953 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 KMT5CQ86Y97 462 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 ADGRF3Q8IZF5 1079 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 BBOF1Q8ND07 529 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 GABPB2Q8TAK5 448 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 ERP44Q9BS26 406 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 CCDC68Q9H2F9 335 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 ZC3H7BQ9UGR2 993 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 FBXO5Q9UKT4 447 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 POMT2Q9UKY4 750 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 ICKQ9UPZ9 632 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 CHMP2BQ9UQN3 213 aa17.41■□□□□ 0.38
PDLIM2-206ENST00000409141 CHD6Q8TD26 2715 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 C2orf74A8MZ97 194 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 RAD51CO43502 376 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 ZBTB11O95625 1053 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 TPBGLP0DKB5 382 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 ERVK-10P10266 1014 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 CDH3P22223 829 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 PRDX3P30048 256 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 TMPRSS3P57727 454 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 HSD11B2P80365 405 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 IL11RAQ14626 422 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
PDLIM2-206ENST00000409141 UNC5AQ6ZN44 842 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms