RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SLC47A1Q96FL8 570 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZMAT2Q96NC0 199 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 VPS35Q96QK1 796 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 REXO4Q9GZR2 422 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 EPS8L2Q9H6S3 715 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 DTLQ9NZJ0 730 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 GJD2Q9UKL4 321 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SAP18O00422 153 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ENTPD5O75356 428 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CNTN5O94779 1100 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 PGLSO95336 258 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 FHP07954 510 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SAGP10523 405 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CD247P20963 164 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ETV3P41162 512 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 PKNOX1P55347 436 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZYG11AQ6WRX3 759 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 HEATR4Q86WZ0 1026 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 OR5M3Q8NGP4 307 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 FAM81AQ8TBF8 368 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ATXN2LQ8WWM7 1075 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 FGF13Q92913 245 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 COQ4Q9Y3A0 265 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SETD1AO15047 1707 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ALS2Q96Q42 1657 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 A0A0D9SEW6 157 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 FAM86C2PA6NEL3 165 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ANKRD66B4E2M5 251 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SCDO00767 359 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 TP53I11O14683 189 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 STC2O76061 302 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CLUP10909 449 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 GKP32189 559 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 VSX2P58304 361 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 COX10Q12887 443 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 DECR1Q16698 335 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 TCHHL1Q5QJ38 904 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 OTUD3Q5T2D3 398 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 HGSNATQ68CP4 663 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ERICH5Q6P6B1 374 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 STK32CQ86UX6 486 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 PROSER1Q86XN7 944 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CREG2Q8IUH2 290 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 GJD3Q8N144 294 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RASGEF1AQ8N9B8 481 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 C7orf57Q8NEG2 295 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 DNAJB14Q8TBM8 379 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 TWIST2Q8WVJ9 160 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 THAP11Q96EK4 314 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 C19orf60Q96EN9 201 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZBED6CLQ96FA7 236 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CDRT15Q96T59 188 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 PAAF1Q9BRP4 392 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 EFCAB11Q9BUY7 163 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 UBE2ZQ9H832 354 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RBM7Q9Y580 266 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 STYXL1Q9Y6J8 313 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 NUMBLQ9Y6R0 609 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RNF225M0QZC1 329 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 M0QZQ0 153 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 NBNO60934 754 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 BMP6P22004 513 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 HNRNPA2B1P22626 353 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CXCR1P25024 350 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 PTPN4P29074 926 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 HNRNPH3P31942 346 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SLC1A2P43004 574 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 PXNP49023 591 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RGS8P57771 180 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 KCNJ2P63252 427 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 FOXK1P85037 733 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZCWPW2Q504Y3 356 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 KLHL26Q53HC5 615 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 NAPRTQ6XQN6 538 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 THOC6Q86W42 341 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZDHHC13Q8IUH4 622 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF483Q8TF39 744 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 MMABQ96EY8 250 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 TOE1Q96GM8 510 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SLC17A9Q9BYT1 436 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 MVB12BQ9H7P6 319 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 TBC1D17Q9HA65 648 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 HEBP1Q9NRV9 189 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 HCFC1R1Q9NWW0 138 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 LYARQ9NX58 379 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 EIF2B4Q9UI10 523 aaKnown RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 CDC7O00311 574 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RGS5O15539 181 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RGS20O76081 388 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 SNX4O95219 450 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 STATHP02808 62 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ALPPP05187 535 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 FAM153BP0C7A2 387 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RYKP34925 604 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 GRK6P43250 576 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 IFI35P80217 286 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 ZNF844Q08AG5 666 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 TMEM115Q12893 351 aaPredicted RBP4.92□□□□□ -1.62
SCN3A-203ENST00000409101 LCP2Q13094 533 aa4.92□□□□□ -1.62
SCN3A-203ENST00000409101 RNF43Q68DV7 783 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms