RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 AGPAT4Q9NRZ5 378 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SLC6A13Q9NSD5 602 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ACSL6Q9UKU0 697 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ELOVL7A1L3X0 281 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MT-ND2P03891 347 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 COX7A2P14406 83 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 KCNE1P15382 129 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 IDUAP35475 653 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 POLD2P49005 469 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 STK19P49842 368 aaPredicted RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 BCAP31P51572 246 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RELAQ04206 551 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 HERC3Q15034 1050 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 KCNA10Q16322 511 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 NKG7Q16617 165 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 RBM23Q86U06 439 aaKnown RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 TSPAN33Q86UF1 283 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SYT12Q8IV01 421 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ABHD11Q8NFV4 315 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MCFD2Q8NI22 146 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 DOK4Q8TEW6 326 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ACDQ96AP0 544 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 NSMCE3Q96MG7 304 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 NECTIN4Q96NY8 510 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 IL4I1Q96RQ9 567 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SLC9A7Q96T83 725 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SIAEQ9HAT2 523 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 TOR4AQ9NXH8 423 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 GIN1Q9NXP7 522 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 DERAQ9Y315 318 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 BRWD3Q6RI45 1802 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 KRBA1A5PL33 1030 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 EVPLLA8MZ36 301 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ADAM12O43184 909 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SLC7A4O43246 635 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 BCAS1O75363 584 aaPredicted RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 MYO1DO94832 1006 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SOX14O95416 240 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 NDST3O95803 873 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 HTR1BP28222 390 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SLC6A4P31645 630 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 FEN1P39748 380 aaKnown RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 MAGEA12P43365 314 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SERPINB10P48595 397 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ATP6V0D1P61421 351 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 TXNL4AP83876 142 aaKnown RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 BNIP2Q12982 314 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MAP2K5Q13163 448 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 CTU2Q2VPK5 515 aaKnown RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 PM20D1Q6GTS8 502 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 KLHL17Q6TDP4 642 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ALKAL1Q6UXT8 129 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MON1AQ86VX9 555 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 TAGAPQ8N103 731 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 GHDCQ8N2G8 530 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 VANGL1Q8TAA9 524 aaPredicted RBP8.17□□□□□ -1.1
SNX13-201ENST00000409076 PROKR1Q8TCW9 393 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 UBASH3BQ8TF42 649 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 STON2Q8WXE9 905 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 WBP2Q969T9 261 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 MFSD1Q9H3U5 465 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 PRDM16Q9HAZ2 1276 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 IMPAD1Q9NX62 359 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SCN3BQ9NY72 215 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 CD300AQ9UGN4 299 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 ZNF510Q9Y2H8 683 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 PRSS21Q9Y6M0 314 aa8.17□□□□□ -1.1
SNX13-201ENST00000409076 SH3PXD2BA1X283 911 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ASPDHA6ND91 283 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 CLPXO76031 633 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 NUDT7P0C024 238 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 CYP2C18P33260 490 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 SMAD3P84022 425 aaKnown RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 AQP6Q13520 282 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 MSANTD2Q6P1R3 559 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 DCDC5Q6ZRR9 648 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TAS1R1Q7RTX1 841 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ADCK2Q7Z695 626 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 C10orf111Q8N326 155 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 STX19Q8N4C7 294 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TMEM199Q8N511 208 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 OR4K1Q8NGD4 311 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 SLC22A17Q8WUG5 538 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 NCSTNQ92542 709 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 TP53INP1Q96A56 240 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ACBD6Q9BR61 282 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LRRC3Q9BY71 257 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ASPSCR1Q9BZE9 553 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ZBTB20Q9HC78 741 aaPredicted RBP8.16□□□□□ -1.1
SNX13-201ENST00000409076 KRT84Q9NSB2 600 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 SEPT3Q9UH03 358 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 ZNF225Q9UK10 706 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 GABRQQ9UN88 632 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 PMF1-BGLAPU3KQ54 211 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LY75O60449 1722 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LTBP1Q14766 1721 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 A0A096LPI6 279 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LOC100130705A0A1B0GUX0 176 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 C2orf78A6NCI8 922 aa8.16□□□□□ -1.1
SNX13-201ENST00000409076 LRRC37AA6NMS7 1700 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms