RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PTBP2Q9UKA9 531 aaKnown RBP20.54■□□□□ 0.88
TPM1-208ENST00000404484 PCTPQ9UKL6 214 aa20.54■□□□□ 0.88
TPM1-208ENST00000404484 MGAT4DA6NG13 374 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 ZNF195O14628 629 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 CCDC22O60826 627 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 POP7O75817 140 aaKnown RBP20.53■□□□□ 0.88
TPM1-208ENST00000404484 MATN4O95460 622 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 CATP04040 527 aaKnown RBP20.53■□□□□ 0.88
TPM1-208ENST00000404484 BCKDHBP21953 392 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 MAP4P27816 1152 aaKnown RBP20.53■□□□□ 0.88
TPM1-208ENST00000404484 OXTRP30559 389 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 RPIAP49247 311 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 HNMTP50135 292 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 RPA4Q13156 261 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 PHKG1Q16816 387 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 ZNF658BQ4V348 819 aaPredicted RBP20.53■□□□□ 0.88
TPM1-208ENST00000404484 LAIR1Q6GTX8 287 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 DOK6Q6PKX4 331 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 EPGNQ6UW88 154 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 HOMEZQ8IX15 550 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 OR56A4Q8NGH8 313 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 SKA1Q96BD8 255 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 SHCBP1LQ9BZQ2 653 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 DPEP2Q9H4A9 486 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 ARL15Q9NXU5 204 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 FAM8A1Q9UBU6 413 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 ZFP69BQ9UJL9 534 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 TMEM98Q9Y2Y6 226 aa20.53■□□□□ 0.88
TPM1-208ENST00000404484 TMEM202A6NGA9 273 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 H3BM21 787 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 CACNB4O00305 520 aaPredicted RBP20.52■□□□□ 0.88
TPM1-208ENST00000404484 DIAPH2O60879 1101 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 GUCA1CO95843 209 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 HOXC4P09017 264 aaPredicted RBP20.52■□□□□ 0.88
TPM1-208ENST00000404484 SERPINB3P29508 390 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 MAT2AP31153 395 aaKnown RBP20.52■□□□□ 0.88
TPM1-208ENST00000404484 IGFALSP35858 605 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 PIK3CGP48736 1102 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 AGTR2P50052 363 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 IDH3AP50213 366 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 CDH13P55290 713 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 PPP2CBP62714 309 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 PPP2CAP67775 309 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 ARHGAP8P85298 464 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 CRTC3Q6UUV7 619 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 AMZ2Q86W34 360 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 RASGRP3Q8IV61 690 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 ZNF547Q8IVP9 402 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 CFAP206Q8IYR0 622 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 FITM2Q8N6M3 262 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 DLG3Q92796 817 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 FOXJ1Q92949 421 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 RHBDF1Q96CC6 855 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 ERP27Q96DN0 273 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 NCDNQ9UBB6 729 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 EIF2B4Q9UI10 523 aaKnown RBP20.52■□□□□ 0.88
TPM1-208ENST00000404484 PDE10AQ9Y233 779 aa20.52■□□□□ 0.88
TPM1-208ENST00000404484 LRRC14BA6NHZ5 514 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 KMOO15229 486 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 SLC31A1O15431 190 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 PSIP1O75475 530 aaKnown RBP20.51■□□□□ 0.87
TPM1-208ENST00000404484 SEMA4FO95754 770 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 FGF4P08620 206 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 ACSL1P33121 698 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 PKNOX1P55347 436 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 ACAD11Q709F0 780 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 MAVSQ7Z434 540 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 MTDHQ86UE4 582 aaKnown RBP20.51■□□□□ 0.87
TPM1-208ENST00000404484 CLYBLQ8N0X4 340 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 OXR1Q8N573 874 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 TRPC4APQ8TEL6 797 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 HGH1Q9BTY7 390 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 LGR4Q9BXB1 951 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 MID1IP1Q9NPA3 183 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 CD93Q9NPY3 652 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 TRAF6Q9Y4K3 522 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 OR1A2Q9Y585 309 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 E2F3O00716 465 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 FPGTO14772 594 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 GRID2O43424 1007 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 RETP07949 1114 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 HNRNPA2B1P22626 353 aaKnown RBP20.51■□□□□ 0.87
TPM1-208ENST00000404484 PREPP48147 710 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 RBBP7Q16576 425 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 LACTB2Q53H82 288 aaPredicted RBP20.51■□□□□ 0.87
TPM1-208ENST00000404484 RPS27LQ71UM5 84 aaKnown RBP20.51■□□□□ 0.87
TPM1-208ENST00000404484 EFL1Q7Z2Z2 1120 aaKnown RBP20.51■□□□□ 0.87
TPM1-208ENST00000404484 CHCHD4Q8N4Q1 142 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 AGAP11Q8TF27 550 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 ZNF382Q96SR6 550 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 APOOQ9BUR5 198 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 CD244Q9BZW8 370 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 MYLK2Q9H1R3 596 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 OPTCQ9UBM4 332 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 GMEB2Q9UKD1 530 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 ANGPTL3Q9Y5C1 460 aa20.51■□□□□ 0.87
TPM1-208ENST00000404484 UBFD1O14562 309 aaKnown RBP20.5■□□□□ 0.87
TPM1-208ENST00000404484 ZNF217O75362 1048 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 CRCPO75575 148 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 KELP23276 732 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms