RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 KIR3DX1Q9H7L2 352 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 GPAMQ9HCL2 828 aa28.59■■■□□ 2.17
USP42-202ENST00000404008 DCDC2BA2VCK2 349 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 PHGDHO43175 533 aaKnown RBP28.58■■■□□ 2.17
USP42-202ENST00000404008 SIM1P81133 766 aaPredicted RBP28.58■■■□□ 2.17
USP42-202ENST00000404008 SPRED1Q7Z699 444 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 CMC1Q7Z7K0 106 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 FOPNLQ96NB1 174 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 PPCSQ9HAB8 311 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 SYTL2Q9HCH5 934 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 PSMC3IPQ9P2W1 217 aaPredicted RBP28.58■■■□□ 2.17
USP42-202ENST00000404008 PCDHGA1Q9Y5H4 931 aa28.58■■■□□ 2.17
USP42-202ENST00000404008 LILRA5A6NI73 299 aa28.57■■■□□ 2.16
USP42-202ENST00000404008 RFPL3O75679 317 aa28.57■■■□□ 2.16
USP42-202ENST00000404008 RPN2P04844 631 aa28.57■■■□□ 2.16
USP42-202ENST00000404008 CSRP3P50461 194 aa28.57■■■□□ 2.16
USP42-202ENST00000404008 PDLIM5Q96HC4 596 aaKnown RBP28.57■■■□□ 2.16
USP42-202ENST00000404008 HGH1Q9BTY7 390 aa28.57■■■□□ 2.16
USP42-202ENST00000404008 PSIP1O75475 530 aaKnown RBP28.56■■■□□ 2.16
USP42-202ENST00000404008 TCEA3O75764 348 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 DKK1O94907 266 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 ALDOAP04075 364 aaKnown RBP28.56■■■□□ 2.16
USP42-202ENST00000404008 CRABP2P29373 138 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 MAPK9P45984 424 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 SERPINB8P50452 374 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 OR1D5P58170 312 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 SLCO6A1Q86UG4 719 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 RASGRP3Q8IV61 690 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 MYO1HQ8N1T3 1032 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 NKAPQ8N5F7 415 aaKnown RBP28.56■■■□□ 2.16
USP42-202ENST00000404008 Q8N9G6 341 aaPredicted RBP28.56■■■□□ 2.16
USP42-202ENST00000404008 OR2W6PQ8NHA6 318 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 ASB11Q8WXH4 323 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 ISL2Q96A47 359 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 TBC1D10AQ9BXI6 508 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 SNX15Q9NRS6 342 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 KCNK4Q9NYG8 393 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 POLG2Q9UHN1 485 aa28.56■■■□□ 2.16
USP42-202ENST00000404008 KRT37O76014 449 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 C1orf105O95561 183 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 FTH1P19P0C7X4 201 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 SLC35E2BP0CK96 405 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 ALDH4A1P30038 563 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 EPHA4P54764 986 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 PRKG2Q13237 762 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 LGSNQ5TDP6 509 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 DCUN1D3Q8IWE4 304 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 ANKRD49Q8WVL7 239 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 HNRNPLLQ8WVV9 542 aaKnown RBP28.55■■■□□ 2.16
USP42-202ENST00000404008 SPTBN4Q9H254 2564 aa28.55■■■□□ 2.16
USP42-202ENST00000404008 COL27A1Q8IZC6 1860 aaPredicted RBP28.54■■■□□ 2.16
USP42-202ENST00000404008 TRIM49D1C9J1S8 452 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 GFYI3L273 518 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 B4GAT1O43505 415 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 SNRPAP09012 282 aaKnown RBP28.54■■■□□ 2.16
USP42-202ENST00000404008 PUM1Q14671 1186 aaKnown RBP eCLIP28.54■■■□□ 2.16
USP42-202ENST00000404008 CCDC157Q569K6 752 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 RAPH1Q70E73 1250 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 TDRPQ86YL5 185 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 OR52E1Q8NGJ3 308 aa28.54■■■□□ 2.16
USP42-202ENST00000404008 EPS8L3Q8TE67 593 aaKnown RBP28.54■■■□□ 2.16
USP42-202ENST00000404008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP28.54■■■□□ 2.16
USP42-202ENST00000404008 IGHV1OR21-1A0A087WYE8 117 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 CASC3O15234 703 aaKnown RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 ZW10O43264 779 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 CCNFP41002 786 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 MAGEA12P43365 314 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 BDKRB1P46663 353 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 PLCL1Q15111 1095 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 BEND6Q5SZJ8 279 aaPredicted RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 JPH3Q8WXH2 748 aaPredicted RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 MTBPQ96DY7 904 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 UBXN10Q96LJ8 280 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 TFB2MQ9H5Q4 396 aaKnown RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 CTNNAL1Q9UBT7 734 aa28.53■■■□□ 2.16
USP42-202ENST00000404008 APOBEC2Q9Y235 224 aaKnown RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 TDRKHQ9Y2W6 561 aaKnown RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 CNOT1A5YKK6 2376 aaKnown RBP28.53■■■□□ 2.16
USP42-202ENST00000404008 IQANK1A0A1B0GTG1 560 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 ARHGEF33A8MVX0 844 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 CATP04040 527 aaKnown RBP28.52■■■□□ 2.16
USP42-202ENST00000404008 CCDC166P0CW27 439 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 TPBGLP0DKB5 382 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 TYK2P29597 1187 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 SLCO1A2P46721 670 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 CCL7P80098 99 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 GPLD1P80108 840 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 GRB7Q14451 532 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 RASA2Q15283 850 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 CCDC91Q7Z6B0 441 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 CNPY4Q8N129 248 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 LRRN3Q9H3W5 708 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 EURLQ9NYK6 297 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 ADAMTS6Q9UKP5 1117 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 PLAAQ9Y263 795 aa28.52■■■□□ 2.16
USP42-202ENST00000404008 A0A1W2PQM1 296 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 OPA1O60313 960 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 UBXN7O94888 489 aa28.51■■■□□ 2.16
USP42-202ENST00000404008 RPLP0P05388 317 aaKnown RBP28.51■■■□□ 2.16
USP42-202ENST00000404008 C8GP07360 202 aa28.51■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms