RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 MCMDC2Q4G0Z9 681 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 KRTCAP3Q53RY4 240 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 RAD9BQ6WBX8 426 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 ARMC9Q7Z3E5 817 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 GALNT5Q7Z7M9 940 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 GPR180Q86V85 440 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 ARID3BQ8IVW6 561 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 CEP97Q8IW35 865 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 SLC38A5Q8WUX1 472 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 NUDCD2Q8WVJ2 157 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 ABTB1Q969K4 478 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 TMEM19Q96HH6 336 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 ADGRG7Q96K78 797 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 SEMA3CQ99985 751 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 C1QTNF1Q9BXJ1 281 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 TM6SF1Q9BZW5 370 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 CSTL1Q9H114 145 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 LRRC4Q9HBW1 653 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 PIH1D3Q9NQM4 214 aaKnown RBP4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 ARHGEF38Q9NXL2 777 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 CLIC5Q9NZA1 410 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 UBA2Q9UBT2 640 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 PLAGL1Q9UM63 463 aa4.84□□□□□ -1.63
HMGB3P19-201ENST00000403971 DDX60LQ5H9U9 1706 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 COL4A5P29400 1685 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 GAKO14976 1311 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZMYM6O95789 1325 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 CCDC171Q6TFL3 1326 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF532Q9HCE3 1301 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 A0A0D9SFI3 127 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 A0A0G2JPF8 293 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 LRRC72A6NJI9 287 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 HNRNPCL3B7ZW38 293 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ADAM20O43506 726 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 SLC28A2O43868 658 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMCC2O75069 709 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF217O75362 1048 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 RSL1D1O76021 490 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 PPP1R3DO95685 299 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 HNRNPCL4P0DMR1 293 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 SAT1P21673 171 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 HRH2P25021 359 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 NNMTP40261 264 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 GSTO1P78417 241 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 COG7P83436 770 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF585BQ52M93 769 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 IGSF11Q5DX21 431 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 NAA16Q6N069 864 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 PDXDC1Q6P996 788 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 CWC27Q6UX04 472 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 C1orf87Q8N0U7 546 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 NME8Q8N427 588 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ZNF441Q8N8Z8 693 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 UTP15Q8TED0 518 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 THOC3Q96J01 351 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 CEP295NLQ96MC4 621 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 DOCK7Q96N67 2140 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ABHD1Q96SE0 405 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 DDOQ99489 341 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 GFI1Q99684 422 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 DBNDD1Q9H9R9 158 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 MRPL15Q9P015 296 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 RAI14Q9P0K7 980 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 EXO1Q9UQ84 846 aaKnown RBP4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 ADAMTSL1Q8N6G6 1762 aa4.83□□□□□ -1.64
HMGB3P19-201ENST00000403971 MROH7-TTC4A0A0A0MT08 1334 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 UTRNP46939 3433 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 LNP1A1A4G5 178 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM8BA6NDV4 472 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 YDJCA8MPS7 323 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 HNRNPCL2B2RXH8 293 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 GPAA1O43292 621 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 BAG3O95817 575 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 T-ENOLP0DO92 83 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 ITGA2P17301 1181 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TRIM21P19474 475 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 MCCP23508 829 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 RPS12P25398 132 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 HSD17B4P51659 736 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 PNLIPRP2P54317 469 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 MECOMQ03112 1051 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 RELQ04864 619 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 SNTA1Q13424 505 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TNIP1Q15025 636 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 SLC39A14Q15043 492 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 ALX1Q15699 326 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 NTRK2Q16620 822 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 PRSS57Q6UWY2 283 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 GFRALQ6UXV0 394 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 C16orf82Q7Z2V1 217 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 RBM23Q86U06 439 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMEM219Q86XT9 240 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 DZIP1Q86YF9 867 aaKnown RBP4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 MAP7D3Q8IWC1 876 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 TMTC2Q8N394 836 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 CERS5Q8N5B7 392 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 EMC1Q8N766 993 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 BBS10Q8TAM1 723 aa4.82□□□□□ -1.64
HMGB3P19-201ENST00000403971 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms