RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 USP51Q70EK9 711 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 PLEKHH3Q7Z736 793 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 VTCN1Q7Z7D3 282 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 GATAD2AQ86YP4 633 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 LEMD2Q8NC56 503 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 MDGA1Q8NFP4 955 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 DOK1Q99704 481 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 EBPLQ9BY08 206 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 CIPCQ9C0C6 399 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 WDR12Q9GZL7 423 aaKnown RBP9.01□□□□□ -0.97
HPS4-203ENST00000402105 ZBTB20Q9HC78 741 aaPredicted RBP9.01□□□□□ -0.97
HPS4-203ENST00000402105 ADARB2Q9NS39 739 aaKnown RBP9.01□□□□□ -0.97
HPS4-203ENST00000402105 SLC6A13Q9NSD5 602 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 GIT1Q9Y2X7 761 aa9.01□□□□□ -0.97
HPS4-203ENST00000402105 POLR2AP24928 1970 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 LCHNA4D1U4 455 aa9□□□□□ -0.97
HPS4-203ENST00000402105 RGS5O15539 181 aa9□□□□□ -0.97
HPS4-203ENST00000402105 CREG1O75629 220 aa9□□□□□ -0.97
HPS4-203ENST00000402105 VIPP01282 170 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PGRP06401 933 aa9□□□□□ -0.97
HPS4-203ENST00000402105 ALPIP09923 528 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PABPC1P11940 636 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 POU2F1P14859 743 aa9□□□□□ -0.97
HPS4-203ENST00000402105 BTG3Q14201 252 aaPredicted RBP9□□□□□ -0.97
HPS4-203ENST00000402105 SF1Q15637 639 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 CYP27C1Q4G0S4 372 aa9□□□□□ -0.97
HPS4-203ENST00000402105 ZNF362Q5T0B9 420 aaPredicted RBP9□□□□□ -0.97
HPS4-203ENST00000402105 GTF2IRD2BQ6EKJ0 949 aa9□□□□□ -0.97
HPS4-203ENST00000402105 DOK6Q6PKX4 331 aa9□□□□□ -0.97
HPS4-203ENST00000402105 SPATC1Q76KD6 591 aa9□□□□□ -0.97
HPS4-203ENST00000402105 EFL1Q7Z2Z2 1120 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 GTF2IRD2Q86UP8 949 aa9□□□□□ -0.97
HPS4-203ENST00000402105 RNF175Q8N4F7 328 aa9□□□□□ -0.97
HPS4-203ENST00000402105 UTP15Q8TED0 518 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 REXO5Q96IC2 774 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 INPP5KQ9BT40 448 aa9□□□□□ -0.97
HPS4-203ENST00000402105 OSBPL10Q9BXB5 764 aa9□□□□□ -0.97
HPS4-203ENST00000402105 DERL2Q9GZP9 239 aa9□□□□□ -0.97
HPS4-203ENST00000402105 RNF167Q9H6Y7 350 aa9□□□□□ -0.97
HPS4-203ENST00000402105 ATP13A1Q9HD20 1204 aa9□□□□□ -0.97
HPS4-203ENST00000402105 EXOSC4Q9NPD3 245 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 SMPD4Q9NXE4 827 aa9□□□□□ -0.97
HPS4-203ENST00000402105 SLCO3A1Q9UIG8 710 aa9□□□□□ -0.97
HPS4-203ENST00000402105 ENPP5Q9UJA9 477 aa9□□□□□ -0.97
HPS4-203ENST00000402105 SAMHD1Q9Y3Z3 626 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 FAM32AQ9Y421 112 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 PCDHB14Q9Y5E9 798 aa9□□□□□ -0.97
HPS4-203ENST00000402105 LCTP09848 1927 aa9□□□□□ -0.97
HPS4-203ENST00000402105 EFCAB9A8MZ26 197 aa9□□□□□ -0.97
HPS4-203ENST00000402105 NT5C1B-RDH14C9J2C7 533 aa9□□□□□ -0.97
HPS4-203ENST00000402105 M0R129 80 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PFDN6O15212 129 aa9□□□□□ -0.97
HPS4-203ENST00000402105 RAD51BO15315 384 aa9□□□□□ -0.97
HPS4-203ENST00000402105 NDST3O95803 873 aa9□□□□□ -0.97
HPS4-203ENST00000402105 CHRNA1P02708 482 aa9□□□□□ -0.97
HPS4-203ENST00000402105 CYP11A1P05108 521 aa9□□□□□ -0.97
HPS4-203ENST00000402105 HLA-DPA1P20036 260 aa9□□□□□ -0.97
HPS4-203ENST00000402105 MSH3P20585 1137 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PBX3P40426 434 aa9□□□□□ -0.97
HPS4-203ENST00000402105 ZXDBP98169 803 aa9□□□□□ -0.97
HPS4-203ENST00000402105 GRSF1Q12849 480 aaKnown RBP eCLIP9□□□□□ -0.97
HPS4-203ENST00000402105 SLC16A12Q6ZSM3 486 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PTRH1Q86Y79 214 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 ANKRD13BQ86YJ7 626 aa9□□□□□ -0.97
HPS4-203ENST00000402105 DCP2Q8IU60 420 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 RIMKLAQ8IXN7 391 aa9□□□□□ -0.97
HPS4-203ENST00000402105 COLGALT2Q8IYK4 626 aa9□□□□□ -0.97
HPS4-203ENST00000402105 C10orf111Q8N326 155 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PIK3C3Q8NEB9 887 aa9□□□□□ -0.97
HPS4-203ENST00000402105 RHEBL1Q8TAI7 183 aa9□□□□□ -0.97
HPS4-203ENST00000402105 PROX1Q92786 737 aa9□□□□□ -0.97
HPS4-203ENST00000402105 DMRTB1Q96MA1 342 aa9□□□□□ -0.97
HPS4-203ENST00000402105 DPH2Q9BQC3 489 aaPredicted RBP9□□□□□ -0.97
HPS4-203ENST00000402105 TRIM62Q9BVG3 475 aa9□□□□□ -0.97
HPS4-203ENST00000402105 YTHDF1Q9BYJ9 559 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 ARNT2Q9HBZ2 717 aa9□□□□□ -0.97
HPS4-203ENST00000402105 TRMT13Q9NUP7 481 aaKnown RBP9□□□□□ -0.97
HPS4-203ENST00000402105 TPRKBQ9Y3C4 175 aa9□□□□□ -0.97
HPS4-203ENST00000402105 F5H5T6 163 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 E2F3O00716 465 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 PRSS23O95084 383 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 RPS17P08708 135 aaKnown RBP8.99□□□□□ -0.97
HPS4-203ENST00000402105 CHRM5P08912 532 aaPredicted RBP8.99□□□□□ -0.97
HPS4-203ENST00000402105 S100A3P33764 101 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 COPZ1P61923 177 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 NFKB2Q00653 900 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 ZNF33AQ06730 810 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 TRAF3Q13114 568 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 DMC1Q14565 340 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 OXA1LQ15070 435 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 CTF1Q16619 201 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 DENND1CQ8IV53 801 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 UBE2J2Q8N2K1 259 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 PDPRQ8NCN5 879 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 LGALS12Q96DT0 336 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 BOCQ9BWV1 1114 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 GPN2Q9H9Y4 310 aaPredicted RBP8.99□□□□□ -0.97
HPS4-203ENST00000402105 SLC52A3Q9NQ40 469 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 ZIM2Q9NZV7 527 aa8.99□□□□□ -0.97
HPS4-203ENST00000402105 FBXO10Q9UK96 956 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms