RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 STK39Q9UEW8 545 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 FBXO5Q9UKT4 447 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PSMD13Q9UNM6 376 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 CDYLQ9Y232 598 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 TBC1D30Q9Y2I9 924 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 SPEF1Q9Y4P9 236 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PCDHGA9Q9Y5G4 932 aaKnown RBP6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PCDHGA8Q9Y5G5 932 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PCDHGA7Q9Y5G6 932 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PCDHGA6Q9Y5G7 932 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PCDHGA3Q9Y5H0 932 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 PCDHGA2Q9Y5H1 932 aa6.72□□□□□ -1.33
CSNK2A1-204ENST00000400227 CHD5Q8TDI0 1954 aa6.71□□□□□ -1.33
CSNK2A1-204ENST00000400227 VWA8A3KMH1 1905 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 KLHL33A6NCF5 533 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 E9PAM4 449 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 AIM2O14862 343 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 INPPL1O15357 1258 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 MSI1O43347 362 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 PMPCBO75439 489 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 B3GAT3O94766 335 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 SNUPNO95149 360 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CELF2O95319 508 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 WISP3O95389 354 aaPredicted RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 POMCP01189 267 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 STMN1P16949 149 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 XRCC1P18887 633 aaPredicted RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 ATP5F1P24539 256 aaPredicted RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CD52P31358 61 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CCR1P32246 355 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 NUDT2P50583 147 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 RAB27AP51159 221 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 AQP4P55087 323 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 KRTAP10-2P60368 255 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 IRX1P78414 480 aaPredicted RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 SATB1Q01826 763 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 MRPL49Q13405 166 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CEACAM7Q14002 265 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CYLC2Q14093 348 aaPredicted RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 PCBP2Q15366 365 aaKnown RBP eCLIP6.71□□□□□ -1.344e-6■■■■■ 48.8
CSNK2A1-204ENST00000400227 MAPRE1Q15691 268 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 ZNF789Q5FWF6 425 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 TECRLQ5HYJ1 363 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 RBM20Q5T481 1227 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 TMEM198Q66K66 360 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 ZNF280DQ6N043 979 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 NEPROQ6NW34 567 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 MSANTD2Q6P1R3 559 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CNSTQ6PJW8 725 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 LRRC49Q8IUZ0 686 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 PGAM4Q8N0Y7 254 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 PELI3Q8N2H9 469 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 SLC39A13Q96H72 371 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 C1orf74Q96LT6 269 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 UROC1Q96N76 676 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 BTBD9Q96Q07 612 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CDRT15Q96T59 188 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 SERPINI1Q99574 410 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 SMAD5Q99717 465 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 OMDQ99983 421 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 DDX50Q9BQ39 737 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 FAM192AQ9GZU8 254 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 SLC25A51Q9H1U9 297 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 MRPL46Q9H2W6 279 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 ARNT2Q9HBZ2 717 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 ZBTB26Q9HCK0 441 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 TBC1D13Q9NVG8 400 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 CLIC5Q9NZA1 410 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 C6orf203Q9P0P8 240 aaPredicted RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 TRPS1Q9UHF7 1281 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 PACSIN3Q9UKS6 424 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 PADI3Q9ULW8 664 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 G3BP2Q9UN86 482 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 HS3ST4Q9Y661 456 aa6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 COPG1Q9Y678 874 aaKnown RBP6.71□□□□□ -1.34
CSNK2A1-204ENST00000400227 UTRNP46939 3433 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 A0A0U1RQF3 1178 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 TRPC5OSA6NMA1 111 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 TMEM233B4DJY2 109 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 C1QTNF3-AMACRE9PGA6 284 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 TADA2AO75478 443 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 BCAS2O75934 225 aaPredicted RBP6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 PAPSS2O95340 614 aaPredicted RBP6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 ITGB1P05556 798 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 MMP2P08253 660 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 ZCCHC18P0CG32 403 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 HSPA1AP0DMV8 641 aaKnown RBP6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 HSPA1BP0DMV9 641 aaKnown RBP6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 VCLP18206 1134 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 KCNA5P22460 613 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 DPP6P42658 865 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 ALDH1A3P47895 512 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 LEPRP48357 1165 aaKnown RBP6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 CLCN5P51795 746 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 KPNA2P52292 529 aaKnown RBP6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 NDST2P52849 883 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 THOP1P52888 689 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 TSPY1Q01534 308 aa6.7□□□□□ -1.34
CSNK2A1-204ENST00000400227 SULT2A1Q06520 285 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms