RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 TMEM130Q8N3G9 435 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 NIPA2Q8N8Q9 360 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 SLC4A11Q8NBS3 891 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 BPIFB1Q8TDL5 484 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 RAPGEF5Q92565 580 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 ZNF707Q96C28 371 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 ELMOD3Q96FG2 381 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 PRR11Q96HE9 360 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 ANKRD36BP1Q96IX9 119 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 SENP8Q96LD8 212 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 ZNF560Q96MR9 790 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 PRICKLE1Q96MT3 831 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 CAMK1GQ96NX5 476 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 HNRNPABQ99729 332 aaKnown RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 PKP2Q99959 881 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 TLR10Q9BXR5 811 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 OSBPL8Q9BZF1 889 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 ZNF350Q9GZX5 532 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 STMN4Q9H169 189 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 RIBC2Q9H4K1 309 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 EPHX3Q9H6B9 360 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 SMPD3Q9NY59 655 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 GDE1Q9NZC3 331 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 JKAMPQ9P055 326 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 ANKMY1Q9P2S6 941 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 HSFX1Q9UBD0 423 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 CRNNQ9UBG3 495 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 HESX1Q9UBX0 185 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 SIX4Q9UIU6 781 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 GMEB2Q9UKD1 530 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 FBXW2Q9UKT8 454 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 SLC30A1Q9Y6M5 507 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 CACNA1HO95180 2353 aa5.31□□□□□ -1.56
HMGB3P7-201ENST00000400214 KIF26AQ9ULI4 1882 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 A0A0A6YYC8 382 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CCDC195A0A1B0GUA6 201 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 WDR27A2RRH5 827 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 C5orf51A6NDU8 294 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 OR6C75A6NL08 312 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 LRRIQ3A6PVS8 624 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 FADS2P1A8MWK0 482 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 EIF3CLB5ME19 914 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 I3L1I5 382 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 NUDT21O43809 227 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CBFA2T3O75081 653 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TACC1O75410 805 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 MTX2O75431 263 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TNNC2P02585 160 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 ITGB3P05106 788 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 RHOXF2BP0C7M4 288 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TMEM191BP0C7N4 346 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 RAP2AP10114 183 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 EPXP11678 715 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 ODC1P11926 461 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 NEFHP12036 1026 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 ZNF8P17098 575 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 GALP22466 123 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 FDXRP22570 491 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 RPL13P26373 211 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 MGAT1P26572 445 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CA8P35219 290 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 RDXP35241 583 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 HNF1BP35680 557 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 PTGER3P43115 390 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CORO7P57737 925 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TFAMQ00059 246 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CD83Q01151 205 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 LRRC63Q05C16 580 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 SMARCB1Q12824 385 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 BNIP3Q12983 259 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 GPR17Q13304 367 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 STK11Q15831 433 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 HADHQ16836 314 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 C1orf220Q5T0J3 134 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TAF3Q5VWG9 929 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 AFMIDQ63HM1 303 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 KANK2Q63ZY3 851 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 ANKRD34AQ69YU3 496 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 ANKRD40Q6AI12 368 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 NHLRC1Q6VVB1 395 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TRIM72Q6ZMU5 477 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CHSY3Q70JA7 882 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TRAPPC11Q7Z392 1133 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 SLCO6A1Q86UG4 719 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CAND1Q86VP6 1230 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 AMZ2Q86W34 360 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 PALB2Q86YC2 1186 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 RFX6Q8HWS3 928 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 DCP2Q8IU60 420 aaKnown RBP5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 TMEM86AQ8N2M4 240 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 CSGALNACT2Q8N6G5 542 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 OR7G3Q8NG95 312 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 OR5B17Q8NGF7 314 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 LRRC8CQ8TDW0 803 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 ROBO4Q8WZ75 1007 aa5.3□□□□□ -1.56
HMGB3P7-201ENST00000400214 MMABQ96EY8 250 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms