RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 XRCC1P18887 633 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 IMPDH1P20839 514 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 ITPKAP23677 461 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 GRK2P25098 689 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 NDUFS1P28331 727 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 PDHA2P29803 388 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 GMPRP36959 345 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 MNAT1P51948 309 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 C21orf59P57076 290 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 BNC1Q01954 994 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 HSPA14Q0VDF9 509 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 SIM2Q14190 667 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 ARHGAP19Q14CB8 494 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 SETDB1Q15047 1291 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 SEPT7Q16181 437 aaKnown RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 OGFOD3Q6PK18 319 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 IL27RAQ6UWB1 636 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 KANSL1Q7Z3B3 1105 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 C17orf82Q86X59 251 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 RBM12BQ8IXT5 1001 aaKnown RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 CHCHD4Q8N4Q1 142 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 DEFB119Q8N690 84 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 OR5K2Q8NHB8 316 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 HMGCLL1Q8TB92 370 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 MDM1Q8TC05 714 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 SREK1Q8WXA9 508 aaKnown RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 CCT6BQ92526 530 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TSACCQ96A04 125 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 CCDC138Q96M89 665 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 ANKRD27Q96NW4 1050 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TRIM54Q9BYV2 358 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 IRF2BPLQ9H1B7 796 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 KIR3DX1Q9H7L2 352 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TM7SF3Q9NS93 570 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 SPASTQ9UBP0 616 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 RNF112Q9ULX5 631 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 PDE10AQ9Y233 779 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TNPO3Q9Y5L0 923 aaKnown RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 ST14Q9Y5Y6 855 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TMEM131Q92545 1883 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 KIR2DS5A0A0G2JLQ3 304 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 A0A0G2JNG1 304 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 A8MT66 165 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 KIR2DS3K7RE56 304 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TRIM13O60858 407 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 SNNO75324 88 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 IPO13O94829 963 aaKnown RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 ACP5P13686 325 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 PREPP48147 710 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 DHPSP49366 369 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 HNRNPKP61978 463 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP16-203ENST00000399975 KIR2DS5Q14953 304 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 ELOCQ15369 112 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TGFBIQ15582 683 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 CYP2A13Q16696 494 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 TLDC1Q6P9B6 456 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 ZC3H14Q6PJT7 736 aaKnown RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 UBE2R2Q712K3 238 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 CEP68Q76N32 757 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 LILRA3Q8N6C8 439 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 ANKRD42Q8N9B4 389 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 CFAP61Q8NHU2 1237 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 MCOLN3Q8TDD5 553 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 ZNF483Q8TF39 744 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 STON2Q8WXE9 905 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 ATL1Q8WXF7 558 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 DLG3Q92796 817 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 WWP1Q9H0M0 922 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 STK38LQ9Y2H1 464 aa6.68□□□□□ -1.34
USP16-203ENST00000399975 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.68□□□□□ -1.34
USP16-203ENST00000399975 ARHGEF33A8MVX0 844 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 TK2O00142 265 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 IFRD1O00458 451 aaPredicted RBP6.67□□□□□ -1.34
USP16-203ENST00000399975 FFAR2O15552 330 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 SERPINE1P05121 402 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 RPS17P08708 135 aaKnown RBP6.67□□□□□ -1.34
USP16-203ENST00000399975 SLC35G4P0C7Q5 338 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 MTHFD1P11586 935 aaKnown RBP6.67□□□□□ -1.34
USP16-203ENST00000399975 PBLDP30039 288 aaPredicted RBP6.67□□□□□ -1.34
USP16-203ENST00000399975 SLC6A12P48065 614 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 HERVK_113P63132 956 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 ILF3Q12906 894 aaKnown RBP eCLIP6.67□□□□□ -1.34
USP16-203ENST00000399975 SRSF5Q13243 272 aaKnown RBP6.67□□□□□ -1.34
USP16-203ENST00000399975 GRB7Q14451 532 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 RPE65Q16518 533 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 PLA2G2CQ5R387 149 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 ATG16L1Q676U5 607 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 CHST15Q7LFX5 561 aaPredicted RBP6.67□□□□□ -1.34
USP16-203ENST00000399975 PIGWQ7Z7B1 504 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 GKN2Q86XP6 184 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 HID1Q8IV36 788 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 NUDCD3Q8IVD9 361 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 DCUN1D3Q8IWE4 304 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 KIRREL3Q8IZU9 778 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 SPATA6LQ8N4H0 392 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 NAT14Q8WUY8 206 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 RHBDF1Q96CC6 855 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 CNDP1Q96KN2 507 aa6.67□□□□□ -1.34
USP16-203ENST00000399975 TRMOQ9BU70 441 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms