RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 RNF148Q8N7C7 305 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 MINDY2Q8NBR6 621 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PNPT1Q8TCS8 783 aaKnown RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SLC35C1Q96A29 364 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SLC22A18Q96BI1 424 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 HAVCR1Q96D42 359 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 MFSD14AQ96MC6 490 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 FBXL18Q96ME1 805 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 BDH2Q9BUT1 245 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ALG2Q9H553 416 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SNX7Q9UNH6 387 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ADAMTS13Q76LX8 1427 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SCDO00767 359 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SDC3O75056 442 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CCR3P51677 355 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CDH4P55283 916 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SCN1BQ07699 218 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 BNIP3Q12983 259 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PON2Q15165 354 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 LDLRAP1Q5SW96 308 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 TATDN1Q6P1N9 297 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 THAP3Q8WTV1 239 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 HDAC10Q969S8 669 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 TRPS1Q9UHF7 1281 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PCYOX1Q9UHG3 505 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CFAP20Q9Y6A4 193 aaKnown RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 NRP1O14786 923 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CALCAP01258 141 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 TRBC1P01850 177 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 CYP4B1P13584 511 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PRKAR1BP31321 381 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 RASA2Q15283 850 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 PARP15Q460N3 678 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SSX6Q7RTT6 188 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 C12orf56Q8IXR9 622 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF276Q8N554 614 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ZDHHC12Q96GR4 267 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SEC14L3Q9UDX4 400 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 A0A1W2PQ72 361 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 E9PAM4 449 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 SCGB2A1O75556 95 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 MTHFD1P11586 935 aaKnown RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 MAMLD1Q13495 774 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 C5orf22Q49AR2 442 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ZBTB49Q6ZSB9 765 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 TMPRSS6Q8IU80 811 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 RASGEF1CQ8N431 466 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 C12orf76Q8N812 135 aaPredicted RBP10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ZFAND2BQ8WV99 257 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 TGM7Q96PF1 710 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 RDH8Q9NYR8 311 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 TAGLN3Q9UI15 199 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 MFHAS1Q9Y4C4 1052 aa10.8□□□□□ -0.68
CACNA1C-216ENST00000399638 ADGRA3Q8IWK6 1321 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ELOA3DA6NLF2 546 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 CPSF4LA6NMK7 179 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SPATA31C2B4DYI2 1134 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 DUX1O43812 170 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MT-ND5P03915 603 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SSX2Q16385 188 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ELOA3BQ3SY89 546 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 CPTPQ5TA50 214 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MED27Q6P2C8 311 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 RHBDF2Q6PJF5 856 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ELOA3Q8NG57 546 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF184Q99676 751 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 BRD7Q9NPI1 651 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MAP4K5Q9Y4K4 846 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 hCG_1807616A0A1W2PRN6 198 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 DNM1LO00429 736 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MRASO14807 208 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 RENP00797 406 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 FGF1P05230 155 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 GOT1P17174 413 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 HOXB8P17481 243 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MLC1Q15049 377 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TAB1Q15750 504 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ZIK1Q3SY52 487 aaPredicted RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 KLHL26Q53HC5 615 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 PRRT3Q5FWE3 981 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 BRMS1LQ5PSV4 323 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 NDRG1Q92597 394 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TLCD1Q96CP7 247 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 BTBD10Q9BSF8 475 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 RAB11FIP5Q9BXF6 653 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 SMG9Q9H0W8 520 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 NSUN3Q9H649 340 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 RFXANKO14593 260 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 CYP11A1P05108 521 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 RPS3AP61247 264 aaKnown RBP10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 ZNF234Q14588 700 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 C1orf186Q6ZWK4 172 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 TMEM192Q8IY95 271 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 MEIOBQ8N635 442 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 LRRC17Q8N6Y2 441 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 OR4E2Q8NGC2 313 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 OR52K2Q8NGK3 314 aa10.79□□□□□ -0.68
CACNA1C-216ENST00000399638 NSMCE3Q96MG7 304 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms