RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 HNRNPH3P31942 346 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 UPP1Q16831 310 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 LRRC26Q2I0M4 334 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 NAPRTQ6XQN6 538 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 RASSF6Q6ZTQ3 369 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 LNX2Q8N448 690 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CPSF7Q8N684 471 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 GSTCDQ8NEC7 633 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 SLC22A17Q8WUG5 538 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 AZIN2Q96A70 460 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CLCC1Q96S66 551 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 C8orf33Q9H7E9 229 aaPredicted RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 PLGRKTQ9HBL7 147 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 APOBEC3GQ9HC16 384 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CKLFQ9UBR5 152 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CDH7Q9ULB5 785 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 RBM47A0AV96 593 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 TAF4O00268 1085 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 PPEF2O14830 753 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 NR2F6P10588 404 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 PRKCHP24723 683 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ATXN1P54253 815 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 FUKQ8N0W3 1084 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 MFSD3Q96ES6 412 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 MARCH7Q9H992 704 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 GDAP2Q9NXN4 497 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 TRIM3O75382 744 aaPredicted RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 UBXN7O94888 489 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 MT-ND1P03886 318 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 NUDT17P0C025 328 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 L1CAMP32004 1257 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CSTF2P33240 577 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 RGS8P57771 180 aaPredicted RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ACTR3P61158 418 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ADGRF1Q5T601 910 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 GLYATQ6IB77 296 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 TMC8Q8IU68 726 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 TDRD1Q9BXT4 1180 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ARL8BQ9NVJ2 186 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 MAGEL2Q9UJ55 1249 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 MAFFQ9ULX9 164 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 JMJD7P0C870 316 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 DRD4P21917 467 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CPN2P22792 545 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CCNCP24863 283 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 MAGEA11P43364 429 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CHIT1Q13231 466 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CRYBG2Q8N1P7 616 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CLEC4CQ8WTT0 213 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ESAMQ96AP7 390 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 TPK1Q9H3S4 243 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ABCB9Q9NP78 766 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 SLX4Q8IY92 1834 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 RLN1P04808 185 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 LAPTM5Q13571 262 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 CBFBQ13951 182 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 PGBD2Q6P3X8 592 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 FRRS1Q6ZNA5 592 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 AMZ2Q86W34 360 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 GPR65Q8IYL9 337 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ZNF567Q8N184 647 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 SFRP1Q8N474 314 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 SRFBP1Q8NEF9 429 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 OR5M3Q8NGP4 307 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 FBXW11Q9UKB1 542 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 REXO2Q9Y3B8 237 aaKnown RBP14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 ARL5AQ9Y689 179 aa14.01□□□□□ -0.17
PCDHA11-201ENST00000398640 YJEFN3A6XGL0 299 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 VNN1O95497 513 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 SIM2Q14190 667 aaPredicted RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 SMARCD3Q6STE5 483 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 COX4I2Q96KJ9 171 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 LRCH4O75427 683 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 ETS2P15036 469 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 CAPGP40121 348 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 MNDAP41218 407 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 ARCN1P48444 511 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 CDK9P50750 372 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 RPP38P78345 283 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 TPRG1Q6ZUI0 275 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 MON1BQ7L1V2 547 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 GHDCQ8N2G8 530 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 FAR1Q8WVX9 515 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 KCTD13Q8WZ19 329 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 TCAF1Q9Y4C2 921 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 TRAPPC6AO75865 159 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 KLF8O95600 359 aaPredicted RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 TRPS1Q9UHF7 1281 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 COL18A1P39060 1754 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 TMEM150CB9EJG8 249 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 ZNF623O75123 536 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 MTRF1O75570 445 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 TYRP14679 529 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 GNALP38405 381 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 STARP49675 285 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 RPS24P62847 133 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 CLCQ05315 142 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 RIPK1Q13546 671 aa14□□□□□ -0.17
PCDHA11-201ENST00000398640 ELOAQ14241 798 aaKnown RBP14□□□□□ -0.17
PCDHA11-201ENST00000398640 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms