RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF534Q76KX8 674 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 OOSP2Q86WS3 158 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 ZFAND4Q86XD8 727 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 DTX1Q86Y01 620 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 FBXO25Q8TCJ0 367 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 SNRNP27Q8WVK2 155 aaKnown RBP14.19□□□□□ -0.14
SEC13-208ENST00000397109 KIFC1Q9BW19 673 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 TSSK1BQ9BXA7 367 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 ZNF768Q9H5H4 540 aaKnown RBP14.19□□□□□ -0.14
SEC13-208ENST00000397109 MVB12BQ9H7P6 319 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 TREX1Q9NSU2 369 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 CATSPERZQ9NTU4 200 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 PSD3Q9NYI0 1048 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 ZFHX4Q86UP3 3567 aa14.19□□□□□ -0.14
SEC13-208ENST00000397109 TCRBV7S3A2A0A539 114 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 K7ENP7 123 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 MLNP12872 115 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 MGAT1P26572 445 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 HSD17B3P37058 310 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 MAGEA3P43357 314 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 LEPRP48357 1165 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 ATP1A2P50993 1020 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 CRADDP78560 199 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 DHX9Q08211 1270 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 CBLBQ13191 982 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 MANEAQ5SRI9 462 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 ANKRD22Q5VYY1 191 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 IZUMO3Q5VZ72 239 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 ANKS6Q68DC2 871 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 HIBCHQ6NVY1 386 aaPredicted RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 DUS1LQ6P1R4 473 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 CYB5D1Q6P9G0 228 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 INO80CQ6PI98 192 aaPredicted RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 CCDC81Q6ZN84 652 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 RELL1Q8IUW5 271 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 MPP5Q8N3R9 675 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 ACVR1CQ8NER5 493 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 KLHL6Q8WZ60 621 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 ELMO1Q92556 727 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 TFGQ92734 400 aaPredicted RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 ZIM3Q96PE6 472 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 FERD3LQ96RJ6 166 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 TRIM31Q9BZY9 425 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 CPNE5Q9HCH3 593 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 WDR70Q9NW82 654 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 HRASLS2Q9NWW9 162 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 SEMA5BQ9P283 1151 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 RALYQ9UKM9 306 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 SOX13Q9UN79 622 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 PRSS21Q9Y6M0 314 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 MAGEB16A2A368 324 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 OR5K3A6NET4 321 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 GOLGA6L10A6NI86 522 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 H3BQF6 201 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 POLR1CO15160 346 aaPredicted RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 CD3EAPO15446 510 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 OR1I1O60431 355 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 NUDT17P0C025 328 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 NMBRP28336 390 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 PDHA2P29803 388 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 SEPHS1P49903 392 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 PRKAA1Q13131 559 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 TGIF1Q15583 401 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 ARHGAP40Q5TG30 622 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 FAM92BQ6ZTR7 304 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 KMT5CQ86Y97 462 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 CARFQ8N187 725 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 UBL7Q96S82 380 aaPredicted RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 PHACTR1Q9C0D0 580 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 XAB2Q9HCS7 855 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 SYBUQ9NX95 663 aa14.18□□□□□ -0.14
SEC13-208ENST00000397109 SIDT1Q9NXL6 827 aaKnown RBP14.18□□□□□ -0.14
SEC13-208ENST00000397109 NBEAQ8NFP9 2946 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 OR6C74A6NCV1 312 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 TLCD2A6NGC4 264 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 MATN2O00339 956 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 PRMT5O14744 637 aaPredicted RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 PFDN6O15212 129 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 NELFEP18615 380 aaKnown RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 PAMP19021 973 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 PREPP48147 710 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 PMS2P54278 862 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 RHDQ02161 417 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 IL11RAQ14626 422 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 SYTL3Q4VX76 610 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 SDCCAG8Q86SQ7 713 aaPredicted RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 CAND1Q86VP6 1230 aaKnown RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 LRRC6Q86X45 466 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 LCN9Q8WX39 176 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 JPH3Q8WXH2 748 aaPredicted RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 PMEPA1Q969W9 287 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 SERPINB12Q96P63 405 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 TRIT1Q9H3H1 467 aaKnown RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 SRMSQ9H3Y6 488 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 TFB2MQ9H5Q4 396 aaKnown RBP14.17□□□□□ -0.14
SEC13-208ENST00000397109 SAMD15Q9P1V8 674 aa14.17□□□□□ -0.14
SEC13-208ENST00000397109 UBA6A0AVT1 1052 aaPredicted RBP14.16□□□□□ -0.14
SEC13-208ENST00000397109 SLC5A10A0PJK1 596 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms