RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 AQP12AQ8IXF9 295 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 OR2T34Q8NGX1 318 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 OR2T3Q8NH03 318 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 VPS33AQ96AX1 596 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 LRTM1Q9HBL6 345 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 DNAJC11Q9NVH1 559 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 PTPRSQ13332 1948 aa15.8■□□□□ 0.12
SNX6-202ENST00000396526 LSM1O15116 133 aaKnown RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 MTX2O75431 263 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 MYOGP15173 224 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 MAPK1P28482 360 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 HENMT1Q5T8I9 393 aaKnown RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 CYP2R1Q6VVX0 501 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 LIPIQ6XZB0 460 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 GOLM1Q8NBJ4 401 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 SELENOMQ8WWX9 145 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 VOPP1Q96AW1 172 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 EME1Q96AY2 570 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 VPS35Q96QK1 796 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 HBEGFQ99075 208 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 ABCD2Q9UBJ2 740 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 RNF11Q9Y3C5 154 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 POLR3HQ9Y535 204 aaPredicted RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 HELZP42694 1942 aaKnown RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 MANBAO00462 879 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 CPSF6Q16630 551 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNX6-202ENST00000396526 ZFAND4Q86XD8 727 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 DNAJB14Q8TBM8 379 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 EBF3Q9H4W6 596 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 C1orf109Q9NX04 203 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 PRSS51A0A1B0GVH4 220 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 OR2AG2A6NM03 316 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 H0Y858 1186 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 LZTS3O60299 673 aaPredicted RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 DNAJA2O60884 412 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 G6PDP11413 515 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 MMP12P39900 470 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 EEFSECP57772 596 aaKnown RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 ERVK-21P61565 698 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 GTF2H3Q13889 308 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 CAPRIN1Q14444 709 aaKnown RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 SERPINA13PQ6UXR4 307 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 YAF2Q8IY57 180 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 ZNF366Q8N895 744 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 TMIEQ8NEW7 156 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 SUSD6Q92537 303 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 KCTD14Q9BQ13 255 aaPredicted RBP15.79■□□□□ 0.12
SNX6-202ENST00000396526 MTG2Q9H4K7 406 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 DZANK1Q9NVP4 752 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 GDE1Q9NZC3 331 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 PIKFYVEQ9Y2I7 2098 aa15.79■□□□□ 0.12
SNX6-202ENST00000396526 SLC6A2P23975 617 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 PSMA4P25789 261 aaKnown RBP15.78■□□□□ 0.12
SNX6-202ENST00000396526 GRIA3P42263 894 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 NRIP1P48552 1158 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 ELAVL3Q14576 367 aaKnown RBP15.78■□□□□ 0.12
SNX6-202ENST00000396526 HNRNPA1L2Q32P51 320 aaKnown RBP15.78■□□□□ 0.12
SNX6-202ENST00000396526 RNF111Q6ZNA4 994 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 TRIM46Q7Z4K8 759 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 PROKR1Q8TCW9 393 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 OBP2AQ9NY56 170 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 ACTR3BQ9P1U1 418 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 TBC1D3BA6NDS4 549 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 GFYI3L273 518 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 NME4O00746 187 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 CTSLP07711 333 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 CCR3P51677 355 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 GBX1Q14549 363 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 PTCHD3Q3KNS1 767 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 FAM219BQ5XKK7 198 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 TECPR1Q7Z6L1 1165 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 IFNEQ86WN2 208 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 HID1Q8IV36 788 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 CCM2Q9BSQ5 444 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 FAM8A1Q9UBU6 413 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 C1QTNF3-AMACRE9PGA6 284 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 JAK1P23458 1154 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 TMEM115Q12893 351 aaPredicted RBP15.78■□□□□ 0.12
SNX6-202ENST00000396526 FAM78AQ5JUQ0 283 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 MBOAT1Q6ZNC8 495 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 PARS2Q7L3T8 475 aaKnown RBP15.78■□□□□ 0.12
SNX6-202ENST00000396526 NPAS3Q8IXF0 933 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 ASB16Q96NS5 453 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 SH3GL1Q99961 368 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 LMAN2LQ9H0V9 348 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 ALG2Q9H553 416 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 TMPRSS11EQ9UL52 423 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 AP3M1Q9Y2T2 418 aa15.78■□□□□ 0.12
SNX6-202ENST00000396526 TCRBV3S1A0A5B6 114 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 HEPACAM2A8MVW5 462 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 ARNTLO00327 626 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 ITGB7P26010 798 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 HALP42357 657 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 RFTN2Q52LD8 501 aaPredicted RBP15.77■□□□□ 0.12
SNX6-202ENST00000396526 SFT2D3Q587I9 215 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 TCEAL5Q5H9L2 206 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 CPA6Q8N4T0 437 aa15.77■□□□□ 0.12
SNX6-202ENST00000396526 MYCBPQ99417 103 aaPredicted RBP15.77■□□□□ 0.12
SNX6-202ENST00000396526 SNX13Q9Y5W8 968 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms