RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TYRP1P17643 537 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 AMD1P17707 334 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 MCM3P25205 808 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 SPRP35270 261 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 CBSP35520 551 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 VSNL1P62760 191 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 PDAP1Q13442 181 aaKnown RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 SQSTM1Q13501 440 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 CLPPQ16740 277 aaPredicted RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 KLHL38Q2WGJ6 581 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 MAP9Q49MG5 647 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 SPNS2Q8IVW8 549 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 CPNE9Q8IYJ1 553 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 OR5K2Q8NHB8 316 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 MRRFQ96E11 262 aaKnown RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 OLFM1Q99784 485 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 RDH14Q9HBH5 336 aa18.69■□□□□ 0.58
HOXA9-202ENST00000396345 MTO1Q9Y2Z2 717 aaKnown RBP18.69■□□□□ 0.58
HOXA9-202ENST00000396345 EIF3FO00303 357 aaPredicted RBP18.68■□□□□ 0.58
HOXA9-202ENST00000396345 RGS4P49798 205 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 WDR93Q6P2C0 686 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 PAQR3Q6TCH7 311 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 NEK10Q6ZWH5 1172 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 CACTIN-AS1Q8N1I8 211 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 DCBLD1Q8N8Z6 715 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 OR52E1Q8NGJ3 308 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 UHMK1Q8TAS1 419 aaKnown RBP18.68■□□□□ 0.58
HOXA9-202ENST00000396345 LCN9Q8WX39 176 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 NCSTNQ92542 709 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 DEPDC7Q96QD5 511 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 DPYSL5Q9BPU6 564 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 NUDT22Q9BRQ3 303 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 TFB2MQ9H5Q4 396 aaKnown RBP18.68■□□□□ 0.58
HOXA9-202ENST00000396345 OGFRQ9NZT2 677 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 SLC39A10Q9ULF5 831 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 RUVBL2Q9Y230 463 aaKnown RBP18.68■□□□□ 0.58
HOXA9-202ENST00000396345 TDRKHQ9Y2W6 561 aaKnown RBP18.68■□□□□ 0.58
HOXA9-202ENST00000396345 NFS1Q9Y697 457 aa18.68■□□□□ 0.58
HOXA9-202ENST00000396345 COL27A1Q8IZC6 1860 aaPredicted RBP18.67■□□□□ 0.58
HOXA9-202ENST00000396345 FAM149AA5PLN7 773 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 RIPK2O43353 540 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 CSO75390 466 aaKnown RBP18.67■□□□□ 0.58
HOXA9-202ENST00000396345 MATN4O95460 622 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 ABHD2P08910 425 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 MPC1LP0DKB6 136 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 CSF2RBP32927 897 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 PGGT1BP53609 377 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 LIMK2P53671 638 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 SLC12A2P55011 1212 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 TAS2R39P59534 338 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 POU4F1Q01851 419 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 CFHR1Q03591 330 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 UAP1Q16222 522 aaPredicted RBP18.67■□□□□ 0.58
HOXA9-202ENST00000396345 LRRC8EQ6NSJ5 796 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 TTC23LQ6PF05 361 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 WDR74Q6RFH5 385 aaPredicted RBP18.67■□□□□ 0.58
HOXA9-202ENST00000396345 TMPRSS9Q7Z410 1059 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 DCUN1D3Q8IWE4 304 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 OR4E2Q8NGC2 313 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 EEF1AKMT1Q8WVE0 214 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 GPR22Q99680 433 aa18.67■□□□□ 0.58
HOXA9-202ENST00000396345 KNTC1P50748 2209 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 KDM1AO60341 852 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 C1orf105O95561 183 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 HOXB3P14651 431 aaPredicted RBP18.66■□□□□ 0.58
HOXA9-202ENST00000396345 CCNFP41002 786 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 CAPZBP47756 277 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 IL2P60568 153 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 TARDBPQ13148 414 aaKnown RBP eCLIP18.66■□□□□ 0.58
HOXA9-202ENST00000396345 USP10Q14694 798 aaKnown RBP18.66■□□□□ 0.58
HOXA9-202ENST00000396345 ISXQ2M1V0 245 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 TMEM71Q6P5X7 295 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 CYHR1Q6ZMK1 362 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 MARCH9Q86YJ5 346 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 PLXDC1Q8IUK5 500 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 OR4D9Q8NGE8 314 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 RSC1A1Q92681 617 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 TSPAN17Q96FV3 270 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 SRMSQ9H3Y6 488 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 KLK13Q9UKR3 277 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 WASF3Q9UPY6 502 aa18.66■□□□□ 0.58
HOXA9-202ENST00000396345 OR6C74A6NCV1 312 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 TMX2-CTNND1H3BSU7 103 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 PSIP1O75475 530 aaKnown RBP18.65■□□□□ 0.58
HOXA9-202ENST00000396345 ITGA2BP08514 1039 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 SPINK2P20155 84 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 BDKRB1P46663 353 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 PDX1P52945 283 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 INHBCP55103 352 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 ZNF574Q6ZN55 896 aaPredicted RBP18.65■□□□□ 0.58
HOXA9-202ENST00000396345 PIWIL4Q7Z3Z4 852 aaKnown RBP18.65■□□□□ 0.58
HOXA9-202ENST00000396345 B3GNT8Q7Z7M8 397 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 AMIGO1Q86WK6 493 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 OOSP2Q86WS3 158 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 CEP97Q8IW35 865 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 MYO1HQ8N1T3 1032 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 MAGEC3Q8TD91 643 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 SLC44A1Q8WWI5 657 aa18.65■□□□□ 0.58
HOXA9-202ENST00000396345 LINGO1Q96FE5 620 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms