RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 AK5Q9Y6K8 562 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
NUP50-202ENST00000396096 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 SOCS2O14508 198 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 INPP4BO15327 924 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 CLDN9O95484 217 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 TFAP2AP05549 437 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 C7P10643 843 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 CYP2A6P11509 494 aaPredicted RBP16.43■□□□□ 0.22
NUP50-202ENST00000396096 MTHFD1P11586 935 aaKnown RBP16.43■□□□□ 0.22
NUP50-202ENST00000396096 TYRP14679 529 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 EPORP19235 508 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 HRH2P25021 359 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 VIPR1P32241 457 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 GJA8P48165 433 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 ARHGEF7Q14155 803 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 ATP6AP1Q15904 470 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 ZNF77Q15935 545 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 CYP51A1Q16850 503 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 MBOAT1Q6ZNC8 495 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 UBE2R2Q712K3 238 aaPredicted RBP16.43■□□□□ 0.22
NUP50-202ENST00000396096 SPRED1Q7Z699 444 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 IFNEQ86WN2 208 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 RASGRP3Q8IV61 690 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 TBC1D21Q8IYX1 336 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 ASB11Q8WXH4 323 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 C9orf16Q9BUW7 83 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 ANKRD60Q9BZ19 345 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 LRTM1Q9HBL6 345 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 ARL15Q9NXU5 204 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 MARK1Q9P0L2 795 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 INSL6Q9Y581 213 aa16.43■□□□□ 0.22
NUP50-202ENST00000396096 HIDE1A8MVS5 230 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 FFAR3O14843 346 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 KPNA5O15131 536 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 GPR42O15529 346 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 CLPTM1O96005 669 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 KRT6AP02538 564 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 KRT6BP04259 564 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 ATP1B2P14415 290 aaPredicted RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 SLC6A12P48065 614 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 KRT6CP48668 564 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 HNMTP50135 292 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 CNPY1Q3B7I2 92 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 CACHD1Q5VU97 1274 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 NEK10Q6ZWH5 1172 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 EPHX4Q8IUS5 362 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 RGL4Q8IZJ4 473 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 FRS2Q8WU20 508 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 SLC13A3Q8WWT9 602 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 OTUB2Q96DC9 234 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 HEPHQ9BQS7 1158 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 RPF2Q9H7B2 306 aaKnown RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 FARSBQ9NSD9 589 aaKnown RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 ERVW-1Q9UQF0 538 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 NPIPB8E9PQR5 432 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 GFYI3L273 518 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 AP2A2O94973 939 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 PCSK2P16519 638 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 PRPH2P23942 346 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 RECQLP46063 649 aaPredicted RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 VASPP50552 380 aaPredicted RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 DGKQP52824 942 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 OR4D2P58180 307 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 HABP4Q5JVS0 413 aaKnown RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 AADATQ8N5Z0 425 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 LEMD2Q8NC56 503 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 TFAP2CQ92754 450 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 BIRC7Q96CA5 298 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 CCDC115Q96NT0 180 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 CLMPQ9H6B4 373 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 RAD18Q9NS91 495 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 C1orf109Q9NX04 203 aa16.42■□□□□ 0.22
NUP50-202ENST00000396096 MBD1Q9UIS9 605 aaPredicted RBP16.42■□□□□ 0.22
NUP50-202ENST00000396096 KCNE1BA0A087WTH5 132 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 ARHGAP10A1A4S6 786 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 SERTM1A2A2V5 107 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 ZBBXA8MT70 800 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 KCNH1O95259 989 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 IL6P05231 212 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 RHOP08100 348 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 NCK1P16333 377 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 HOXA9P31269 272 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 AKT1P31749 480 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 PEX19P40855 299 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 HMGCS1Q01581 520 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 PTGR1Q14914 329 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 ADRM1Q16186 407 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 IMPG1Q17R60 797 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 ZXDCQ2QGD7 858 aaPredicted RBP16.41■□□□□ 0.22
NUP50-202ENST00000396096 USP39Q53GS9 565 aaKnown RBP16.41■□□□□ 0.22
NUP50-202ENST00000396096 LY6G5CQ5SRR4 150 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 TMTC4Q5T4D3 741 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 SATL1Q86VE3 508 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 GALNT15Q8N3T1 639 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 CBR4Q8N4T8 237 aa16.41■□□□□ 0.22
NUP50-202ENST00000396096 L3MBTL4Q8NA19 623 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms