RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 VITQ6UXI7 678 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LAPTM4BQ86VI4 370 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TNFAIP8L1Q8WVP5 186 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 GSDMCQ9BYG8 508 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TPK1Q9H3S4 243 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CD84Q9UIB8 345 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LINGO4Q6UY18 593 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NUP54Q7Z3B4 507 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LDB1Q86U70 411 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FAM129CQ86XR2 697 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 C2orf73Q8N5S3 287 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CMASQ8NFW8 434 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LAMB4A4D0S4 1761 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 WNT9AO14904 365 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SHOX2O60902 331 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TRIM3O75382 744 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 AP2A2O94973 939 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NR4A1P22736 598 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 DGKGP49619 791 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 QPCTQ16769 361 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SLC30A6Q6NXT4 461 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 OXR1Q8N573 874 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FITM2Q8N6M3 262 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ARL14EPQ8N8R7 260 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 SUN3Q8TAQ9 357 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PPP1R13LQ8WUF5 828 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CLEC4DQ8WXI8 215 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 LPGAT1Q92604 370 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 TMCO6Q96DC7 493 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 ABCG8Q9H221 673 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 FKBP14Q9NWM8 211 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 NOCTQ9UK39 431 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PDE10AQ9Y233 779 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 REXO2Q9Y3B8 237 aaKnown RBP5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHGB5Q9Y5G0 923 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 PCDHGA2Q9Y5H1 932 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 CLCA3PQ9Y6N3 262 aa5.37□□□□□ -1.55
VPS13C-204ENST00000395898 MYH14Q7Z406 1995 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NPPAP01160 153 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PIM1P11309 404 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CRISP3P54108 245 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SLC18A1P54219 525 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RAB15P59190 212 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RPS14P62263 151 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 GHRHRQ02643 423 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 IL18R1Q13478 541 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ZFP69Q49AA0 526 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 IFI44LQ53G44 452 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 LPCAT4Q643R3 524 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NIPAL1Q6NVV3 410 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 MBOAT1Q6ZNC8 495 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 FATE1Q969F0 183 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 FZD8Q9H461 694 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SLC32A1Q9H598 525 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CD320Q9NPF0 282 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TUBA8Q9NY65 449 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 FBXW2Q9UKT8 454 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 Q9Y3F1 56 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SEMA3DO95025 777 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 E2F2Q14209 437 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CXorf57Q6NSI4 855 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 MOB2Q70IA6 237 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NXPE1Q8N323 547 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NAT8LQ8N9F0 302 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 LRRN4Q8WUT4 740 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TMEM209Q96SK2 561 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CA12O43570 354 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CCNB2O95067 398 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CD48P09326 243 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PIK3CBP42338 1070 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ARCN1P48444 511 aaKnown RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SPATS1Q496A3 300 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ADGRF1Q5T601 910 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SLCO2A1Q92959 643 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF570Q96NI8 536 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NEUROD4Q9HD90 331 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ARL8BQ9NVJ2 186 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 C14orf105Q9NVL8 296 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 CNTN3Q9P232 1028 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 WRBO00258 174 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 AIREO43918 545 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 TNFP01375 233 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RLN1P04808 185 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SMPD1P17405 629 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NRSN1Q8IZ57 195 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ZNF433Q8N7K0 673 aaPredicted RBP5.36□□□□□ -1.55
VPS13C-204ENST00000395898 SLC13A3Q8WWT9 602 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 UFD1Q92890 307 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 RGMAQ96B86 450 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 P2RX2Q9UBL9 471 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 INSL6Q9Y581 213 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ATRNL1Q5VV63 1379 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 OR4Q2P0C623 313 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ARF5P84085 180 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 NFKB2Q00653 900 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 C6orf52Q5T4I8 152 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 PPP2R2DQ66LE6 453 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ISLR2Q6UXK2 745 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 ADGRD2Q7Z7M1 963 aa5.36□□□□□ -1.55
VPS13C-204ENST00000395898 IFNLR1Q8IU57 520 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms