RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 WWP1Q9H0M0 922 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 CLSTN2Q9H4D0 955 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 MRM3Q9HC36 420 aaKnown RBP13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 MAGEE1Q9HCI5 957 aa13.16□□□□□ -0.3
VCPKMT-201ENST00000395859 C17orf113A0A1B0GUU1 675 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 GSAPA4D1B5 854 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 H3BRJ5 948 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 MATN3O15232 486 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 PRAMEF2O60811 474 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 RASAL1O95294 804 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 ALBP02768 609 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 HLA-DQB2P05538 268 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 UGT1A4P22310 534 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 CA4P22748 312 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 IL1R2P27930 398 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 PCOLCEQ15113 449 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 Q71RC1 249 aaPredicted RBP13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 BRSK1Q8TDC3 778 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 TUBGCP2Q9BSJ2 902 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.3
VCPKMT-201ENST00000395859 DYTNA2CJ06 578 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 TMEM191CA6NGB0 347 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 VSTM2BA6NLU5 285 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 EPHB6O15197 1021 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 SNRNP200O75643 2136 aaKnown RBP13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 HPP00738 406 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 NDUFS1P28331 727 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 TMPRSS15P98073 1019 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 GALNT2Q10471 571 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 GTF2H3Q13889 308 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 SLC5A12Q1EHB4 618 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 DEFB110Q30KQ9 67 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 TMEM198Q66K66 360 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 TMEM220Q6QAJ8 160 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ADGRF3Q8IZF5 1079 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 C19orf47Q8N9M1 422 aaKnown RBP13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ACVR1CQ8NER5 493 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 GPR137Q96N19 417 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ALPK1Q96QP1 1244 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 RBM22Q9NW64 420 aaKnown RBP eCLIP13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 KCNN3Q9UGI6 736 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ST6GALNAC2Q9UJ37 374 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF711Q9Y462 761 aa13.14□□□□□ -0.31
VCPKMT-201ENST00000395859 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 MGAT4DA6NG13 374 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 FOXO6A8MYZ6 492 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 E9PLN8 166 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 AURKAO14965 403 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 USP1O94782 785 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 SLCO2B1O94956 709 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 PIRTP0C851 137 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 TCF4P15884 667 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 SERPINB6P35237 376 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF165P49910 485 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 PMP22Q01453 160 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 CEBPEQ15744 281 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 TLDC1Q6P9B6 456 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF655Q8N720 491 aaPredicted RBP13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 BEND7Q8N7W2 519 aaPredicted RBP13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 DDHD1Q8NEL9 900 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 FLVCR1-AS1Q8TAF5 88 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 BRIX1Q8TDN6 353 aaKnown RBP13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 TSGA13Q96PP4 275 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 VKORC1Q9BQB6 163 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 SRMSQ9H3Y6 488 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 LIME1Q9H400 295 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 TSPY26PQ9H489 355 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 TFB2MQ9H5Q4 396 aaKnown RBP13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 ZNF358Q9NW07 568 aa13.13□□□□□ -0.31
VCPKMT-201ENST00000395859 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 GPR39O43194 453 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 PMPCBO75439 489 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 WDPCPO95876 746 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 PRR35P0CG20 571 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 DESP17661 470 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 MSX1P28360 303 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 ARL4AP40617 200 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 CD86P42081 329 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 ATG9BQ674R7 924 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 SPESP1Q6UW49 350 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 TMEM200AQ86VY9 491 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 DNAJC22Q8N4W6 341 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 DNAAF3Q8N9W5 541 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 OR2L2Q8NH16 312 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 CA5BP1Q8WTZ4 195 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 LCN9Q8WX39 176 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 TADA1Q96BN2 335 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 SDCCAG3Q96C92 435 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 MAGED4Q96JG8 741 aa13.12□□□□□ -0.31
VCPKMT-201ENST00000395859 ADGRE3Q9BY15 652 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms