RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ABCE1P61221 599 aaKnown RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 BST1Q10588 318 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ANKS6Q68DC2 871 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 WASH2PQ6VEQ5 465 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 CACNA2D3Q8IZS8 1091 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SLC22A18ASQ8N1D0 253 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 CCNYL1Q8N7R7 359 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 CFAP61Q8NHU2 1237 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 OR1E3Q8WZA6 343 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 TFGQ92734 400 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 C1QTNF3Q9BXJ4 246 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 DRC3Q9H069 523 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 TM9SF3Q9HD45 589 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 WASH6PQ9NQA3 447 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SLC23A2Q9UGH3 650 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ADAMTS6Q9UKP5 1117 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 PDE10AQ9Y233 779 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ASF1AQ9Y294 204 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 STK38LQ9Y2H1 464 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ZDBF2Q9HCK1 2354 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ZNF839A8K0R7 811 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 EBAG9O00559 213 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 GIPC1O14908 333 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 VILLO15195 856 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SNNO75324 88 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 SUPT7LO94864 414 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 HSPA4LO95757 839 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 GUCA1CO95843 209 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 FUCA1P04066 466 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SLC2A4P14672 509 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ACADLP28330 430 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 NDUFS1P28331 727 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 HSD17B2P37059 387 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 HK2P52789 917 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 RCN2Q14257 317 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ALG11Q2TAA5 492 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 UAP1L1Q3KQV9 507 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ZNF678Q5SXM1 525 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 CES4AQ5XG92 561 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 PMS2CLQ68D20 193 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 RABEPKQ7Z6M1 372 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SDR16C5Q8N3Y7 309 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 AFAP1L2Q8N4X5 818 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 OR6Y1Q8NGX8 325 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 TSACCQ96A04 125 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 RAD51AP1Q96B01 352 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 SIKE1Q9BRV8 207 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 GATA5Q9BWX5 397 aaPredicted RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 TRIT1Q9H3H1 467 aaKnown RBP13.36□□□□□ -0.27
VAPB-202ENST00000395802 TM7SF3Q9NS93 570 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 ZSCAN32Q9NX65 697 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 WWOXQ9NZC7 414 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 POLG2Q9UHN1 485 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 IKZF3Q9UKT9 509 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 KCNK6Q9Y257 313 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 COLEC10Q9Y6Z7 277 aa13.36□□□□□ -0.27
VAPB-202ENST00000395802 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 A0A1W2PR77 199 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 NEMP2A6NFY4 417 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 PDZK1P1A8MUH7 402 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 TGDSO95455 350 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 MLYCDO95822 493 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 TROVE2P10155 538 aaKnown RBP eCLIP13.35□□□□□ -0.278e-6■■■■□ 26.6
VAPB-202ENST00000395802 AVPR2P30518 371 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 CTBSQ01459 385 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 PRKAA1Q13131 559 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 FZD2Q14332 565 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 PCBP2Q15366 365 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■□□□□ 10.7
VAPB-202ENST00000395802 PHKG1Q16816 387 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 FAM83HQ6ZRV2 1179 aaPredicted RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 ZCCHC23Q6ZST2 131 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 RASGRP3Q8IV61 690 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 DCUN1D3Q8IWE4 304 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 TBC1D21Q8IYX1 336 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 MAML2Q8IZL2 1156 aaPredicted RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 LILRA3Q8N6C8 439 aaPredicted RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 CCDC197Q8NCU1 140 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 OR5K2Q8NHB8 316 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 RHBDF1Q96CC6 855 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 TMEM237Q96Q45 408 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 ILKAPQ9H0C8 392 aaPredicted RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 LNPEPQ9UIQ6 1025 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 PTBP2Q9UKA9 531 aaKnown RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 PCOLCE2Q9UKZ9 415 aa13.35□□□□□ -0.27
VAPB-202ENST00000395802 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 PCYT1BQ9Y5K3 369 aaPredicted RBP13.35□□□□□ -0.27
VAPB-202ENST00000395802 A0A1B0GTW7 788 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 OR5K4A6NMS3 321 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 KATNA1O75449 491 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 C1orf105O95561 183 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 MAOBP27338 520 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 RPL10P27635 214 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 EEF1DP29692 281 aaKnown RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 HOXD12P35452 270 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 GGT5P36269 586 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 ACTR1BP42025 376 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 DHPSP49366 369 aaPredicted RBP13.34□□□□□ -0.27
VAPB-202ENST00000395802 ACTR1AP61163 376 aa13.34□□□□□ -0.27
VAPB-202ENST00000395802 KRT33BQ14525 404 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms