RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 MT-ND3P03897 115 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 PDGFAP04085 211 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 PTMAP06454 111 aaKnown RBP15.67■□□□□ 0.1
CXCL12-206ENST00000395795 CTSBP07858 339 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 NR1D1P20393 614 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 ADRA1DP25100 572 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 ARNTP27540 789 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 PEBP1P30086 187 aaKnown RBP15.67■□□□□ 0.1
CXCL12-206ENST00000395795 IL10RAQ13651 578 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 CCNG2Q16589 344 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 ZNF385CQ66K41 422 aaPredicted RBP15.67■□□□□ 0.1
CXCL12-206ENST00000395795 UNC5AQ6ZN44 842 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 CDHR3Q6ZTQ4 885 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 AMIGO1Q86WK6 493 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 OR8K5Q8NH50 307 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 C9orf43Q8TAL5 461 aaPredicted RBP15.67■□□□□ 0.1
CXCL12-206ENST00000395795 ADAMTS17Q8TE56 1095 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 LRRC45Q96CN5 670 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 OR2A14Q96R47 310 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 TRIM55Q9BYV6 548 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 KLHL25Q9H0H3 589 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 EPN3Q9H201 632 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 TREX1Q9NSU2 369 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 SPHK1Q9NYA1 384 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 ACTR10Q9NZ32 417 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 KCND3Q9UK17 655 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 ZNF148Q9UQR1 794 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 FER1L5A0AVI2 2057 aa15.67■□□□□ 0.1
CXCL12-206ENST00000395795 MED13Q9UHV7 2174 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 MATN2O00339 956 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 IFRD1O00458 451 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-206ENST00000395795 KRT86O43790 486 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CPNE3O75131 537 aaKnown RBP15.66■□□□□ 0.1
CXCL12-206ENST00000395795 KATNA1O75449 491 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 GPC4O75487 556 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CCNYL3P0C7X3 344 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CDH3P22223 829 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 PTPN4P29074 926 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CCR7P32248 378 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 LMAN1P49257 510 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CSRP3P50461 194 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CCZ1BP86790 482 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CCZ1P86791 482 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-206ENST00000395795 TLE1Q04724 770 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 GRB7Q14451 532 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 BRD3Q15059 726 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 RPS6KA1Q15418 735 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 FAM69BQ5VUD6 431 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 ARMC6Q6NXE6 501 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CYB5D1Q6P9G0 228 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 AFTPHQ6ULP2 937 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 FAM198BQ6UWH4 519 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 LDB1Q86U70 411 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-206ENST00000395795 TRIM73Q86UV7 250 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 DSELQ8IZU8 1212 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 DNAAF3Q8N9W5 541 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 ELMO1Q92556 727 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CHST8Q9H2A9 424 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 VPS37BQ9H9H4 285 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 CHRAC1Q9NRG0 131 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 PCMTD2Q9NV79 361 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 POLHQ9Y253 713 aa15.66■□□□□ 0.1
CXCL12-206ENST00000395795 DRG1Q9Y295 367 aaKnown RBP15.66■□□□□ 0.1
CXCL12-206ENST00000395795 HEMK1Q9Y5R4 338 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-206ENST00000395795 SNRNP200O75643 2136 aaKnown RBP15.65■□□□□ 0.1
CXCL12-206ENST00000395795 GSAPA4D1B5 854 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 CDC14CA4D256 554 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 IQCF5A8MTL0 148 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 MEN1O00255 615 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 DNAJB5O75953 348 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 APRTP07741 180 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 UGT2B7P16662 529 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 ARL4DP49703 201 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 PMS2P54278 862 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 GSDMDP57764 484 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 CRADDP78560 199 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 PRKAA1Q13131 559 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 KRT33BQ14525 404 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 UGT8Q16880 541 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 IZUMO3Q5VZ72 239 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 SPESP1Q6UW49 350 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 TMEM126BQ8IUX1 230 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 APLFQ8IW19 511 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-206ENST00000395795 LMNTD1Q8N9Z9 388 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 OR4L1Q8NH43 312 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 OR5K2Q8NHB8 316 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 PEX13Q92968 403 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 AP1M1Q9BXS5 423 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 GPR87Q9BY21 358 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 CLMPQ9H6B4 373 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 EIF2B3Q9NR50 452 aaKnown RBP15.65■□□□□ 0.1
CXCL12-206ENST00000395795 SOHLH2Q9NX45 425 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 PAK5Q9P286 719 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 TLK1Q9UKI8 766 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 PLAGL1Q9UM63 463 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 TP53TG5Q9Y2B4 290 aa15.65■□□□□ 0.1
CXCL12-206ENST00000395795 SETXQ7Z333 2677 aaKnown RBP15.65■□□□□ 0.1
CXCL12-206ENST00000395795 NBASA2RRP1 2371 aa15.64■□□□□ 0.09
CXCL12-206ENST00000395795 TCRBV7S3A2A0A539 114 aa15.64■□□□□ 0.09
CXCL12-206ENST00000395795 PIPSLA2A3N6 862 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms