RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 GPR135Q8IZ08 494 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 ADGRF3Q8IZF5 1079 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 C19orf47Q8N9M1 422 aaKnown RBP15.29■□□□□ 0.04
SNCA-205ENST00000394991 HM13Q8TCT9 377 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 FAR1Q8WVX9 515 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 SYN2Q92777 582 aaPredicted RBP15.29■□□□□ 0.04
SNCA-205ENST00000394991 PTERQ96BW5 349 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 OXNAD1Q96HP4 312 aaPredicted RBP15.29■□□□□ 0.04
SNCA-205ENST00000394991 FERD3LQ96RJ6 166 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 PACSIN1Q9BY11 444 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 XKR8Q9H6D3 395 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 SLC6A20Q9NP91 592 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 ATP13A2Q9NQ11 1180 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 ACTR10Q9NZ32 417 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 IFT80Q9P2H3 777 aaPredicted RBP15.29■□□□□ 0.04
SNCA-205ENST00000394991 NDOR1Q9UHB4 597 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 PKP3Q9Y446 797 aa15.29■□□□□ 0.04
SNCA-205ENST00000394991 MTORP42345 2549 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 SMTNL1A8MU46 457 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 C2orf74A8MZ97 194 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 OR2B3O76000 313 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 EPOP01588 193 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 STSP08842 583 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 PRLHRP49683 370 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 DYNLT1P63172 113 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 DCDP81605 110 aaKnown RBP15.28■□□□□ 0.04
SNCA-205ENST00000394991 AIMP2Q13155 320 aaKnown RBP15.28■□□□□ 0.04
SNCA-205ENST00000394991 SLC1A5Q15758 541 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 CYP2A13Q16696 494 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 VSIG1Q86XK7 387 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 PHC3Q8NDX5 983 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 PROKR1Q8TCW9 393 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 RBM41Q96IZ5 413 aaKnown RBP15.28■□□□□ 0.04
SNCA-205ENST00000394991 BPIFA3Q9BQP9 254 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 CCM2Q9BSQ5 444 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 OR52A5Q9H2C5 316 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 TFB2MQ9H5Q4 396 aaKnown RBP15.28■□□□□ 0.04
SNCA-205ENST00000394991 SLC22A11Q9NSA0 550 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 UVRAGQ9P2Y5 699 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 FKBPLQ9UIM3 349 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 FBXL4Q9UKA2 621 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 ARL5AQ9Y689 179 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 DCHS2Q6V1P9 2916 aa15.28■□□□□ 0.04
SNCA-205ENST00000394991 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 AGPSO00116 658 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 STX7O15400 261 aaKnown RBP15.27■□□□□ 0.04
SNCA-205ENST00000394991 MAP3K7O43318 606 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 PYGMP11217 842 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 NR1I3Q14994 352 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 NKAIN1Q4KMZ8 207 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 ZNF658BQ4V348 819 aaPredicted RBP15.27■□□□□ 0.04
SNCA-205ENST00000394991 SPESP1Q6UW49 350 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 ZC3H18Q86VM9 953 aaKnown RBP15.27■□□□□ 0.04
SNCA-205ENST00000394991 AMIGO1Q86WK6 493 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 RFX6Q8HWS3 928 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 DNAJB14Q8TBM8 379 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 SLX1AQ9BQ83 275 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 HGH1Q9BTY7 390 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 ASB8Q9H765 288 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 COG4Q9H9E3 785 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 SAE1Q9UBE0 346 aaPredicted RBP15.27■□□□□ 0.04
SNCA-205ENST00000394991 COPG2Q9UBF2 871 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 ICKQ9UPZ9 632 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 AP1M2Q9Y6Q5 423 aa15.27■□□□□ 0.04
SNCA-205ENST00000394991 TACC2O95359 2948 aa15.27■□□□□ 0.03
SNCA-205ENST00000394991 AKAP9Q99996 3911 aa15.27■□□□□ 0.03
SNCA-205ENST00000394991 CCDC78A2IDD5 438 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 ZSCAN9O15535 394 aaPredicted RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 SRP72O76094 671 aaKnown RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 KRT1P04264 644 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 UGT2B7P16662 529 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 ZFXP17010 805 aaPredicted RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 PDHA2P29803 388 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 XIAPP98170 497 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 CDC16Q13042 620 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 PRKG2Q13237 762 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 MESDQ14696 234 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 ZNF169Q14929 603 aaPredicted RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 PRAMEF13Q5VWM6 474 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 SARM1Q6SZW1 724 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 MICALCLQ6ZW33 695 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 ZNF655Q8N720 491 aaPredicted RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 OR4K2Q8NGD2 314 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 FLVCR1-AS1Q8TAF5 88 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 N4BP2L2Q92802 583 aaPredicted RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 CNDP1Q96KN2 507 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 FCRL5Q96RD9 977 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 AP1M1Q9BXS5 423 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 MAK16Q9BXY0 300 aaKnown RBP15.26■□□□□ 0.03
SNCA-205ENST00000394991 CACNA1CQ13936 2221 aa15.26■□□□□ 0.03
SNCA-205ENST00000394991 A0A1B0GUH1 482 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 HEATR9A2RTY3 570 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 AGAP14A8MT82 685 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 SOCS6O14544 535 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 CD63P08962 238 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 H2AFZP0C0S5 128 aa15.25■□□□□ 0.03
SNCA-205ENST00000394991 PECAM1P16284 738 aaPredicted RBP15.25■□□□□ 0.03
SNCA-205ENST00000394991 ITGAXP20702 1163 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms