RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RARS2Q5T160 578 aaKnown RBP14.73□□□□□ -0.05
GPC3-202ENST00000394299 ZDHHC20Q5W0Z9 365 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 AMIGO2Q86SJ2 522 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 DHFR2Q86XF0 187 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 GALNT4Q8N4A0 578 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 TMEM102Q8N9M5 508 aaPredicted RBP14.73□□□□□ -0.05
GPC3-202ENST00000394299 LMNTD1Q8N9Z9 388 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 CLHC1Q8NHS4 586 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 ARRDC3Q96B67 414 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 AP2M1Q96CW1 435 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 HOPXQ9BPY8 73 aaPredicted RBP14.73□□□□□ -0.05
GPC3-202ENST00000394299 SLC32A1Q9H598 525 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 CXorf56Q9H5V9 222 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 ACTR8Q9H981 624 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 C6orf203Q9P0P8 240 aaPredicted RBP14.73□□□□□ -0.05
GPC3-202ENST00000394299 ABCD2Q9UBJ2 740 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 DTNAQ9Y4J8 743 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 AP4S1Q9Y587 144 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 PCDHA9Q9Y5H5 950 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 TSPAN11A1L157 253 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 SOBPA7XYQ1 873 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 MANBAO00462 879 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 HOXC11O43248 304 aaPredicted RBP14.73□□□□□ -0.05
GPC3-202ENST00000394299 WDR47O94967 919 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 ADH1CP00326 375 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 MTHFD1P11586 935 aaKnown RBP14.73□□□□□ -0.05
GPC3-202ENST00000394299 NCK1P16333 377 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 PSMC3P17980 439 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 RHDQ02161 417 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 C9orf64Q5T6V5 341 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 IRGCQ6NXR0 463 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 ZFP1Q6P2D0 407 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 DPPA4Q7L190 304 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 SLC22A15Q8IZD6 547 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 TRAM1L1Q8N609 369 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 UBTD2Q8WUN7 234 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 CANT1Q8WVQ1 401 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 BTN2A2Q8WVV5 523 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 GATA6Q92908 595 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 TMEM125Q96AQ2 219 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 NTMT1Q9BV86 223 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 DLGAP2Q9P1A6 1054 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 EPS15L1Q9UBC2 864 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 BCAP29Q9UHQ4 241 aa14.73□□□□□ -0.05
GPC3-202ENST00000394299 DPPA5A6NC42 116 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 TXNDC9O14530 226 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 PDYNP01213 254 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 SRPRAP08240 638 aaKnown RBP14.72□□□□□ -0.05
GPC3-202ENST00000394299 HIST1H2AGP0C0S8 130 aaPredicted RBP14.72□□□□□ -0.05
GPC3-202ENST00000394299 HIST1H2ADP20671 130 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 PDHA2P29803 388 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 TANGO2Q6ICL3 276 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 FBXL19Q6PCT2 694 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 RALGPS2Q86X27 583 aaPredicted RBP14.72□□□□□ -0.05
GPC3-202ENST00000394299 ZFAND4Q86XD8 727 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 CACUL1Q86Y37 369 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 RAVER1Q8IY67 606 aaKnown RBP14.72□□□□□ -0.05
GPC3-202ENST00000394299 KRTCAP2Q8N6L1 136 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 HIST1H2AHQ96KK5 128 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 HIST1H2AJQ99878 128 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 H2AFJQ9BTM1 129 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 PFDN4Q9NQP4 134 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 HEBP1Q9NRV9 189 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 SMOXQ9NWM0 555 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 GID8Q9NWU2 228 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 ZIM2Q9NZV7 527 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 DEC1Q9P2X7 70 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 PCDHGB4Q9UN71 923 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 PCDHGB5Q9Y5G0 923 aa14.72□□□□□ -0.05
GPC3-202ENST00000394299 TCRBV3S1A0A5B6 114 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 FAM234BA2RU67 622 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 GFYI3L273 518 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 SEC22BO75396 215 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 EEDO75530 441 aaKnown RBP14.71□□□□□ -0.05
GPC3-202ENST00000394299 C8BP07358 591 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 EBLN1P0CF75 366 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 TMEM115Q12893 351 aaPredicted RBP14.71□□□□□ -0.05
GPC3-202ENST00000394299 TRAP1Q12931 704 aaKnown RBP14.71□□□□□ -0.05
GPC3-202ENST00000394299 PRKG2Q13237 762 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 SELPLGQ14242 412 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 ZNF284Q2VY69 593 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 NANOGP8Q6NSW7 305 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 SUSD1Q6UWL2 747 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 PIP4K2CQ8TBX8 421 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 GLYATL1Q969I3 302 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 PPM1MQ96MI6 270 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 CCT7Q99832 543 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 MCOLN1Q9GZU1 580 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 NANOGQ9H9S0 305 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 HPS4Q9NQG7 708 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 SLC27A6Q9Y2P4 619 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 DNAH14Q0VDD8 3507 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 TCF20Q9UGU0 1960 aaKnown RBP14.71□□□□□ -0.05
GPC3-202ENST00000394299 EPOPA6NHQ4 379 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 MMP20O60882 483 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 TIPRLO75663 272 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 SMNDC1O75940 238 aaKnown RBP eCLIP14.71□□□□□ -0.051e-10■■■□□ 17.8
GPC3-202ENST00000394299 CLDN9O95484 217 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 GRIK2Q13002 908 aa14.71□□□□□ -0.05
GPC3-202ENST00000394299 ZNF234Q14588 700 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms