RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 TTC29Q8NA56 475 aaPredicted RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 OR4L1Q8NH43 312 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 REXO5Q96IC2 774 aaKnown RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 TSEN34Q9BSV6 310 aaKnown RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 PRKD2Q9BZL6 878 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 MRGBPQ9NV56 204 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 TMLHEQ9NVH6 421 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ITGB1BP2Q9UKP3 347 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 COL11A2P13942 1736 aaPredicted RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 PER2O15055 1255 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 PSMD3O43242 534 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 NUAK1O60285 661 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 UPK1BO75841 260 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 SNRPD2P62316 118 aaKnown RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ERVK-8P63133 956 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 NKX3-2P78367 333 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ZNF404Q494X3 552 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 MARCH8Q5T0T0 291 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 HORMAD1Q86X24 394 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 LSRQ86X29 649 aaPredicted RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 DYNC2LI1Q8TCX1 351 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 DPY30Q9C005 99 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 MMP28Q9H239 520 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 KAT8Q9H7Z6 458 aaKnown RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ABI2Q9NYB9 513 aaPredicted RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 ZNF221Q9UK13 617 aa16.07■□□□□ 0.16
PHTF1-205ENST00000393357 SAMHD1Q9Y3Z3 626 aaKnown RBP16.07■□□□□ 0.16
PHTF1-205ENST00000393357 FHP07954 510 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 SCNN1GP51170 649 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 CREMQ03060 361 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 MBOAT1Q6ZNC8 495 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 GDPD3Q7L5L3 318 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 NECAB2Q7Z6G3 386 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ADHFE1Q8IWW8 467 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 PTCD2Q8WV60 388 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 YTHDF1Q9BYJ9 559 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 SLIRPQ9GZT3 109 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 MROH8Q9H579 483 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 CATSPERBQ9H7T0 1116 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 TAS2R13Q9NYV9 303 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 TPRKBQ9Y3C4 175 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 GGT1P19440 569 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 POU1F1P28069 291 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 CD6P30203 668 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 EIF2DP41214 584 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ZFP36L2P47974 494 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 PPP2R2BQ00005 443 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ZNF235Q14590 738 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 DCAF4L1Q3SXM0 396 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 NEK5Q6P3R8 708 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 LIX1Q8N485 282 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 RNF175Q8N4F7 328 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 OR4F6Q8NGB9 312 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 LILRB4Q8NHJ6 448 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 NTAN1Q96AB6 310 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 IRF2BPLQ9H1B7 796 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 SLC52A3Q9NQ40 469 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 TIGARQ9NQ88 270 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 FAM234BA2RU67 622 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 EIF3FO00303 357 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 GABARAPO95166 117 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 APOA1P02647 267 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ARPC4P59998 168 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 SMARCB1Q12824 385 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 SF1Q15637 639 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 CCDC85BQ15834 202 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ZFP69Q49AA0 526 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 BCL7AQ4VC05 210 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ZCCHC8Q6NZY4 707 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 REM2Q8IYK8 340 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 PARP16Q8N5Y8 322 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 SLC13A3Q8WWT9 602 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 FUBP1Q96AE4 644 aaKnown RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 RPRD1AQ96P16 312 aaPredicted RBP16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ZBTB18Q99592 522 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 INPP5KQ9BT40 448 aa16.06■□□□□ 0.16
PHTF1-205ENST00000393357 ANK1P16157 1881 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 LOC110117498-PIK3R3F6TDL0 507 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 CREG1O75629 220 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 MATN4O95460 622 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 CPSF4O95639 269 aaKnown RBP16.05■□□□□ 0.16
PHTF1-205ENST00000393357 F9P00740 461 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 GRK5P34947 590 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 KRT20P35900 424 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 GPR15P49685 360 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 TIAL1Q01085 375 aaKnown RBP eCLIP16.05■□□□□ 0.16
PHTF1-205ENST00000393357 MED22Q15528 200 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 DDR2Q16832 855 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 C11orf74Q86VG3 221 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 LEMD2Q8NC56 503 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 OR56A4Q8NGH8 313 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 NSUN3Q9H649 340 aaKnown RBP16.05■□□□□ 0.16
PHTF1-205ENST00000393357 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 PCDHGC4Q9Y5F7 938 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 HS3ST4Q9Y661 456 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 DYRK3O43781 588 aa16.05■□□□□ 0.16
PHTF1-205ENST00000393357 CPNE3O75131 537 aaKnown RBP16.05■□□□□ 0.16
PHTF1-205ENST00000393357 ATP4BP51164 291 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms