RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 ALDOCP09972 364 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 VARSP26640 1264 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 MAPK1P28482 360 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 DPP6P42658 865 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 MTHFRP42898 656 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 RPS9P46781 194 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 HTR6P50406 440 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 DNASE1L3Q13609 305 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 MBTPS1Q14703 1052 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 GOLGA7Q7Z5G4 137 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 C11orf96Q7Z7L8 435 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 ST13P5Q8NFI4 369 aaPredicted RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 RHEBL1Q8TAI7 183 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 NUSAP1Q9BXS6 441 aaKnown RBP10.35□□□□□ -0.75
CALD1-203ENST00000393118 EBPLQ9BY08 206 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 SNX6Q9UNH7 406 aa10.35□□□□□ -0.75
CALD1-203ENST00000393118 RFXANKO14593 260 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 H6PDO95479 791 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 AQP1P29972 269 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 PRIM2P49643 509 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 CLK1P49759 484 aaKnown RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 CDK9P50750 372 aaKnown RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 POLR2LP62875 67 aaKnown RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 XKR6Q5GH73 641 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 GPR180Q86V85 440 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 KCNJ9Q92806 393 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 IGSF21Q96ID5 467 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 MGME1Q9BQP7 344 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 DRGXA6NNA5 263 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SLC28A1O00337 649 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 INPPL1O15357 1258 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 TFAP2AP05549 437 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 CYP4B1P13584 511 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 CDH2P19022 906 aaPredicted RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 POLR2EP19388 210 aaKnown RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 HOXD9P28356 352 aaPredicted RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 ACADVLP49748 655 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SGSHP51688 502 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 MPPE1Q53F39 396 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 ZCCHC8Q6NZY4 707 aaKnown RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 FBXL19Q6PCT2 694 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 GATAD2AQ86YP4 633 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 LILRA2Q8N149 483 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SLAIN1Q8ND83 568 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SPPL2AQ8TCT8 520 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 PANX1Q96RD7 426 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 REXO4Q9GZR2 422 aaKnown RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 MAGEL2Q9UJ55 1249 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 FAM234BA2RU67 622 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 MROH6A6NGR9 719 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 VILLO15195 856 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 KLKB1P03952 638 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 GPIP06744 558 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 MMP2P08253 660 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 CDKL1Q00532 357 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 PRR23BQ6ZRT6 265 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 LARP4Q71RC2 724 aaKnown RBP eCLIP10.34□□□□□ -0.75
CALD1-203ENST00000393118 SNX20Q7Z614 316 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 APCDD1Q8J025 514 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 TERB1Q8NA31 727 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SLC13A3Q8WWT9 602 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 L3HYPDHQ96EM0 354 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 BRD9Q9H8M2 597 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 KCTD5Q9NXV2 234 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 SMPD3Q9NY59 655 aaPredicted RBP10.34□□□□□ -0.75
CALD1-203ENST00000393118 PCDH10Q9P2E7 1040 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 EBF1Q9UH73 591 aa10.34□□□□□ -0.75
CALD1-203ENST00000393118 LOC730098B7Z3J9 87 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 C8AP07357 584 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 COL6A1P12109 1028 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ZNF829Q3KNS6 432 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 PLPP4Q5VZY2 271 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 PPP2R2DQ66LE6 453 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 NIPAL1Q6NVV3 410 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 TAGAPQ8N103 731 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 SH3RF2Q8TEC5 729 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 STARD8Q92502 1023 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 FBXL20Q96IG2 436 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 SLC30A3Q99726 388 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 RNF11Q9Y3C5 154 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 WDR81Q562E7 1941 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 AQP12BA6NM10 295 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 CLDN9O95484 217 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 SEC24AO95486 1093 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 PHC1P78364 1004 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 DGCR6Q14129 220 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 NANOGP8Q6NSW7 305 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 Q6ZVU0 165 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 CHST15Q7LFX5 561 aaPredicted RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 RETREG3Q86VR2 466 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 AQP12AQ8IXF9 295 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 CASD1Q96PB1 797 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 LRRC3Q9BY71 257 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 NANOGQ9H9S0 305 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 ACTR3BQ9P1U1 418 aa10.33□□□□□ -0.76
CALD1-203ENST00000393118 FAM32AQ9Y421 112 aaKnown RBP10.33□□□□□ -0.76
CALD1-203ENST00000393118 ZSCAN5BA6NJL1 495 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms