RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 TEX12Q9BXU0 123 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 PITPNM3Q9BZ71 974 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 LAT2Q9GZY6 243 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 FGF22Q9HCT0 170 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 SDR39U1Q9NRG7 319 aaPredicted RBP2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 ECHDC1Q9NTX5 307 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 GIMAP4Q9NUV9 329 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 ATAD3AQ9NVI7 634 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 NSMCE4AQ9NXX6 385 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 LRWD1Q9UFC0 647 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 HACL1Q9UJ83 578 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 MTUS1Q9ULD2 1270 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 RABGAP1Q9Y3P9 1069 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 GRIP1Q9Y3R0 1128 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 ADAMTS9Q9P2N4 1935 aa2.05□□□□□ -2.08
RNU6-541P-201ENST00000384709 LOC101059948A0A1B0GTJ6 334 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 A0A1B0GU03 582 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 FSD2A1L4K1 749 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 MSGN1A6NI15 193 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 B4DLN1 442 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 AP3D1O14617 1153 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 PRKRAO75569 313 aaKnown RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 TSPAN9O75954 239 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 TOMM70O94826 608 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 TPOP07202 933 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 PORP16435 677 aaPredicted RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 CA6P23280 308 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 CEACAM8P31997 349 aaPredicted RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 NRIP1P48552 1158 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 BMXP51813 675 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 MRPL12P52815 198 aaKnown RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 GPR17Q13304 367 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 CUL4AQ13619 759 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZNF790Q6PG37 636 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 FIGLAQ6QHK4 219 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 FAM198BQ6UWH4 519 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 NUDT13Q86X67 352 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 SCML4Q8N228 414 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 MINDY1Q8N5J2 469 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 OR1J1Q8NGS3 322 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 HCAR2Q8TDS4 363 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 MRGPRDQ8TDS7 321 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZNF622Q969S3 477 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 SLC22A18Q96BI1 424 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 MTERF3Q96E29 417 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 SAT2Q96F10 170 aaPredicted RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 LMF2Q9BU23 707 aaKnown RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 FTOQ9C0B1 505 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 EGLN1Q9GZT9 426 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 DPAGT1Q9H3H5 408 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 CHMP1AQ9HD42 196 aaPredicted RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 RNF186Q9NXI6 227 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 ARHGEF38Q9NXL2 777 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 TAS2R14Q9NYV8 317 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 GDE1Q9NZC3 331 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 CRNNQ9UBG3 495 aaPredicted RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 TBC1D29Q9UFV1 150 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZDHHC2Q9UIJ5 367 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 VPS28Q9UK41 221 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZNF215Q9UL58 517 aaPredicted RBP2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 KCNK7Q9Y2U2 307 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 TRIM17Q9Y577 477 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 RNF215Q9Y6U7 377 aa2.04□□□□□ -2.08
RNU6-541P-201ENST00000384709 STK36Q9NRP7 1315 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 IGHV4-4A0A075B6R2 117 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 A0A087WW49 117 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 GLOD5A6NK44 160 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 DNM1LO00429 736 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 GAPDHSO14556 408 aaPredicted RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 KLF11O14901 512 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 CLIC2O15247 247 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 ARHGEF9O43307 516 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 XRCC3O43542 346 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 ENTPD3O75355 529 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZNF821O75541 412 aaPredicted RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 WDHD1O75717 1129 aaPredicted RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 DFFBO76075 338 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 NGFP01138 241 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 RAF1P04049 648 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 GPIP06744 558 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 OR2T7P0C7T2 308 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 NR2F1P10589 423 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 CA4P22748 312 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 HERV-K104P61576 105 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 IRX1P78414 480 aaPredicted RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 CX3CL1P78423 397 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 KCNJ10P78508 379 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 TMF1P82094 1093 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 MAT1AQ00266 395 aaKnown RBP2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 CHAF1BQ13112 559 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 WTAPQ15007 396 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 XKR6Q5GH73 641 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 DCAF10Q5QP82 559 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZNF613Q6PF04 617 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 CORO6Q6QEF8 472 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 ZNF497Q6ZNH5 498 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 SH2D5Q6ZV89 423 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 SLC16A9Q7RTY1 509 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 PIGZQ86VD9 579 aa2.03□□□□□ -2.08
RNU6-541P-201ENST00000384709 MYPOPQ86VE0 399 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms