RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 FAM187BQ17R55 369 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 PARP15Q460N3 678 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 FBXO39Q8N4B4 442 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 ATPAF2Q8N5M1 289 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 AADATQ8N5Z0 425 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 SIGLEC11Q96RL6 698 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 SGIP1Q9BQI5 828 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 CCNB1IP1Q9NPC3 277 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 RAPGEFL1Q9UHV5 662 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 ADAMTS5Q9UNA0 930 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 PEX16Q9Y5Y5 336 aa14.71□□□□□ -0.05
CTNS-202ENST00000381870 MEIOCA2RUB1 952 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 ASB14A6NK59 587 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 LOC110117498-PIK3R3F6TDL0 507 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 PDHXO00330 501 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CTDSP2O14595 271 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CPNE3O75131 537 aaKnown RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 SERPINA1P01009 418 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 YES1P07947 543 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 FDXRP22570 491 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 MAGEA11P43364 429 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 TIGD6Q17RP2 521 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CPZQ66K79 652 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 RAB43Q86YS6 212 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 PHACTR4Q8IZ21 702 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 FAM109AQ8N4B1 249 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 OR8J3Q8NGG0 315 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 PIK3R3Q92569 461 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 EDEM1Q92611 657 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 VPS35Q96QK1 796 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 APOL4Q9BPW4 351 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 KCNS3Q9BQ31 491 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 COLEC11Q9BWP8 271 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 DUSP16Q9BY84 665 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 ULBP1Q9BZM6 244 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 MKRN2Q9H000 416 aaKnown RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 RBM22Q9NW64 420 aaKnown RBP eCLIP14.7□□□□□ -0.06
CTNS-202ENST00000381870 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 GRIP1Q9Y3R0 1128 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 KCTD3Q9Y597 815 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 RLFQ13129 1914 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 ELOVL7A1L3X0 281 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 HMX3A6NHT5 357 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 AGRPO00253 132 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CYP7B1O75881 506 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 WNT3AP56704 352 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CREMQ03060 361 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CYP4F3Q08477 520 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 ARHGEF6Q15052 776 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 RBBP7Q16576 425 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 ANKS6Q68DC2 871 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 Q6ZSR9 355 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 GLRX5Q86SX6 157 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CCDC190Q86UF4 302 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 LSMEM1Q8N8F7 131 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 TTC29Q8NA56 475 aaPredicted RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 APPL2Q8NEU8 664 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 DNASE1L2Q92874 299 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 CDK15Q96Q40 435 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 PRRG3Q9BZD7 231 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 DCAF13Q9NV06 445 aaKnown RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 CCDC59Q9P031 241 aaKnown RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 KCNN3Q9UGI6 736 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 NUFIP1Q9UHK0 495 aaKnown RBP14.7□□□□□ -0.06
CTNS-202ENST00000381870 LYVE1Q9Y5Y7 322 aa14.7□□□□□ -0.06
CTNS-202ENST00000381870 A0A1W2PQ72 361 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 hCG_2039718K7EN88 272 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 ARVCFO00192 962 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 ARNTLO00327 626 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 SLC7A4O43246 635 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 MAFKO60675 156 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 UROSP10746 265 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 EFNA1P20827 205 aaPredicted RBP14.69□□□□□ -0.06
CTNS-202ENST00000381870 CCNCP24863 283 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 AIF1P55008 147 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 MAP3K7CLP57077 242 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 NRG1Q02297 640 aaPredicted RBP14.69□□□□□ -0.06
CTNS-202ENST00000381870 C9orf57Q5W0N0 161 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 DCAF15Q66K64 600 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 ERAP2Q6P179 960 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 SHQ1Q6PI26 577 aaKnown RBP14.69□□□□□ -0.06
CTNS-202ENST00000381870 HORMAD1Q86X24 394 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 ARHGAP12Q8IWW6 846 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 NETO1Q8TDF5 533 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 APH1BQ8WW43 257 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 SNAPC3Q92966 411 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 CHCHD6Q9BRQ6 235 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 ROGDIQ9GZN7 287 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 MMP28Q9H239 520 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 WDCPQ9H6R7 721 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 GALPQ9UBC7 116 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 UBA2Q9UBT2 640 aaPredicted RBP14.69□□□□□ -0.06
CTNS-202ENST00000381870 RNF112Q9ULX5 631 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 AKT3Q9Y243 479 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 SNX8Q9Y5X2 465 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 PCDHGA12O60330 932 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 TSPAN1O60635 241 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 FKBP9O95302 570 aa14.69□□□□□ -0.06
CTNS-202ENST00000381870 RPLP0P05388 317 aaKnown RBP14.69□□□□□ -0.06
CTNS-202ENST00000381870 TXNP10599 105 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms