RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 LILRA3Q8N6C8 439 aaPredicted RBP12.6□□□□□ -0.39
RPAIN-202ENST00000381208 DNAAF3Q8N9W5 541 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 OR52E1Q8NGJ3 308 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 TMEM121Q9BTD3 319 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 TSSK1BQ9BXA7 367 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 NLNQ9BYT8 704 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 SLC7A5P2Q9GIP4 190 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 CHRNA10Q9GZZ6 450 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 SMARCAL1Q9NZC9 954 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 TP53TG5Q9Y2B4 290 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 PCDHGB7Q9Y5F8 929 aa12.6□□□□□ -0.39
RPAIN-202ENST00000381208 PCDHGA9Q9Y5G4 932 aaKnown RBP12.6□□□□□ -0.39
RPAIN-202ENST00000381208 MEN1O00255 615 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 CD63P08962 238 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 FURINP09958 794 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 TPH1P17752 444 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 CDC25BP30305 580 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 ARCN1P48444 511 aaKnown RBP12.59□□□□□ -0.39
RPAIN-202ENST00000381208 ITGA1P56199 1179 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 GPR19Q15760 415 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 DBN1Q16643 649 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 AFTPHQ6ULP2 937 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 ASB18Q6ZVZ8 466 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 HPS6Q86YV9 775 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 PIANPQ8IYJ0 282 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 TBC1D21Q8IYX1 336 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 GPR135Q8IZ08 494 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 DSELQ8IZU8 1212 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 N4BP2L2Q92802 583 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-202ENST00000381208 CLIP3Q96DZ5 547 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 DHRS4Q9BTZ2 278 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 TLR10Q9BXR5 811 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 ACTR5Q9H9F9 607 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-202ENST00000381208 OR6C2Q9NZP2 312 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 TLK1Q9UKI8 766 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 ASF1AQ9Y294 204 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 PADI2Q9Y2J8 665 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 AP1M2Q9Y6Q5 423 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-202ENST00000381208 HECTD1Q9ULT8 2610 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 PTPN13Q12923 2485 aa12.59□□□□□ -0.39
RPAIN-202ENST00000381208 TMEM150CB9EJG8 249 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 C9J4A7 227 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 E7EQ34 232 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 E7EVH7 732 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 AP3B1O00203 1094 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 BTN3A1O00481 513 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 CCL22O00626 93 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 KRT86O43790 486 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 SUN1O94901 812 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 FTCDO95954 541 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 AGXTP21549 392 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 PDHA2P29803 388 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 RORAP35398 523 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 LMAN1P49257 510 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 CDKN1CP49918 316 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-202ENST00000381208 GDF10P55107 478 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 GPS2Q13227 327 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 SYTL3Q4VX76 610 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 AARS2Q5JTZ9 985 aaKnown RBP12.58□□□□□ -0.4
RPAIN-202ENST00000381208 PLEKHS1Q5SXH7 462 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 PPP1R21Q6ZMI0 780 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 ATCAYQ86WG3 371 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 CLDN19Q8N6F1 224 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 ELMO1Q92556 727 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 TCTN2Q96GX1 697 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 SGSM3Q96HU1 749 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 IP6K3Q96PC2 410 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 TRAPPC9Q96Q05 1148 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 RANBP9Q96S59 729 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 CHST8Q9H2A9 424 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 ACSS2Q9NR19 701 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 ACTR10Q9NZ32 417 aa12.58□□□□□ -0.4
RPAIN-202ENST00000381208 PACSIN2Q9UNF0 486 aaPredicted RBP12.58□□□□□ -0.4
RPAIN-202ENST00000381208 BTN3A3O00478 584 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 RPN2P04844 631 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 ST6GAL1P15907 406 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 ADRA1DP25100 572 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 FOXN2P32314 431 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 PGDP52209 483 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 DNAJC21Q5F1R6 531 aaKnown RBP12.57□□□□□ -0.4
RPAIN-202ENST00000381208 FAM199XQ6PEV8 388 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-202ENST00000381208 SPESP1Q6UW49 350 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 C4orf22Q6V702 233 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 TMEM139Q8IV31 216 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 TMEM102Q8N9M5 508 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-202ENST00000381208 PHC3Q8NDX5 983 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 OR52K1Q8NGK4 314 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 OR5K2Q8NHB8 316 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 RNF31Q96EP0 1072 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 HGH1Q9BTY7 390 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 AKIRIN1Q9H9L7 192 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-202ENST00000381208 PAK5Q9P286 719 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 TCFL5Q9UL49 500 aa12.57□□□□□ -0.4
RPAIN-202ENST00000381208 ZNF148Q9UQR1 794 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms