RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 IGFL3Q6UXB1 125 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 SPOCD1Q6ZMY3 1216 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 CCDC50Q8IVM0 306 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 NXPE1Q8N323 547 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 TTC13Q8NBP0 860 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 OR52E1Q8NGJ3 308 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 PROKR1Q8TCW9 393 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 DNAJC7Q99615 494 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 GBA3Q9H227 469 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 COG4Q9H9E3 785 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 AGPAT4Q9NRZ5 378 aa15.49■□□□□ 0.07
VCX3A-201ENST00000381089 AAR2Q9Y312 384 aaKnown RBP15.49■□□□□ 0.07
VCX3A-201ENST00000381089 PTRH2Q9Y3E5 179 aaKnown RBP15.49■□□□□ 0.07
VCX3A-201ENST00000381089 COPG1Q9Y678 874 aaKnown RBP15.49■□□□□ 0.07
VCX3A-201ENST00000381089 PIKFYVEQ9Y2I7 2098 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 BTN3A3O00478 584 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 KLF7O75840 302 aaPredicted RBP15.48■□□□□ 0.07
VCX3A-201ENST00000381089 OR2B3O76000 313 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 CLDN1O95832 211 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 AGTP01019 485 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 COL8A1P27658 744 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 RPA4Q13156 261 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 LLGL1Q15334 1064 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 CYP2A13Q16696 494 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 SPESP1Q6UW49 350 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 CDHR3Q6ZTQ4 885 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 SNX20Q7Z614 316 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 VSTM4Q8IW00 320 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 LILRA3Q8N6C8 439 aaPredicted RBP15.48■□□□□ 0.07
VCX3A-201ENST00000381089 NAT14Q8WUY8 206 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 HAUS1Q96CS2 278 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 TCTN2Q96GX1 697 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 C19orf43Q9BQ61 176 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 AP1M1Q9BXS5 423 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 KLHL25Q9H0H3 589 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 GRPEL1Q9HAV7 217 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 TXLNGQ9NUQ3 528 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 IRAK4Q9NWZ3 460 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 ACTR10Q9NZ32 417 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 IFT80Q9P2H3 777 aaPredicted RBP15.48■□□□□ 0.07
VCX3A-201ENST00000381089 SRPK3Q9UPE1 567 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
VCX3A-201ENST00000381089 HYOU1Q9Y4L1 999 aa15.48■□□□□ 0.07
VCX3A-201ENST00000381089 CRYBG3Q68DQ2 2970 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 AGAP14A8MT82 685 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 H7C0C1 242 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 SGTAO43765 313 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 STK10O94804 968 aaKnown RBP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 ZRANB2O95218 330 aaKnown RBP eCLIP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 GSTM1P09488 218 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 PVRP15151 417 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 ATP5OP48047 213 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 GLRBP48167 497 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 DCDP81605 110 aaKnown RBP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 GSTM4Q03013 218 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 GPR33Q49SQ1 333 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 CCDC181Q5TID7 509 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 ZNF385CQ66K41 422 aaPredicted RBP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 RHBDD2Q6NTF9 364 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 RCOR2Q8IZ40 523 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 C19orf47Q8N9M1 422 aaKnown RBP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 OR2Y1Q8NGV0 311 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 TFGQ92734 400 aaPredicted RBP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 PTERQ96BW5 349 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 PPP1R2P1Q96PQ5 205 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 HGH1Q9BTY7 390 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 OR52A5Q9H2C5 316 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 NHEJ1Q9H9Q4 299 aaPredicted RBP15.47■□□□□ 0.07
VCX3A-201ENST00000381089 ATP13A2Q9NQ11 1180 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 SPTLC3Q9NUV7 552 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 INTUQ9ULD6 942 aa15.47■□□□□ 0.07
VCX3A-201ENST00000381089 CELSR2Q9HCU4 2923 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 hCG_1818297A0A087WSY0 165 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 ZSCAN9O15535 394 aaPredicted RBP15.46■□□□□ 0.07
VCX3A-201ENST00000381089 KDM1AO60341 852 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 SHMT2P34897 504 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 PER3P56645 1201 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 TMPRSS15P98073 1019 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 XIAPP98170 497 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 C1orf189Q5VU69 101 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 IRAK1BP1Q5VVH5 260 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 TLDC1Q6P9B6 456 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 RANBP10Q6VN20 620 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 ADGRF3Q8IZF5 1079 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 SLC34A3Q8N130 599 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 CHRNA10Q9GZZ6 450 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 ZNF552Q9H707 407 aaPredicted RBP15.46■□□□□ 0.07
VCX3A-201ENST00000381089 ABHD10Q9NUJ1 306 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 P4HTMQ9NXG6 502 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 ZDHHC3Q9NYG2 299 aa15.46■□□□□ 0.07
VCX3A-201ENST00000381089 FEZ2Q9UHY8 353 aaPredicted RBP15.46■□□□□ 0.07
VCX3A-201ENST00000381089 CBSLP0DN79 551 aa15.45■□□□□ 0.06
VCX3A-201ENST00000381089 CBSP35520 551 aa15.45■□□□□ 0.06
VCX3A-201ENST00000381089 AIMP2Q13155 320 aaKnown RBP15.45■□□□□ 0.06
VCX3A-201ENST00000381089 PRKG2Q13237 762 aa15.45■□□□□ 0.06
VCX3A-201ENST00000381089 BOP1Q14137 746 aaKnown RBP15.45■□□□□ 0.06
VCX3A-201ENST00000381089 TCEAL1Q15170 157 aa15.45■□□□□ 0.06
VCX3A-201ENST00000381089 TICAM1Q8IUC6 712 aa15.45■□□□□ 0.06
VCX3A-201ENST00000381089 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
VCX3A-201ENST00000381089 ST6GALNAC3Q8NDV1 305 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms