RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 OR8K5Q8NH50 307 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 APOBEC4Q8WW27 367 aaKnown RBP18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 HDAC10Q969S8 669 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 ELMO2Q96JJ3 720 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 IL22Q9GZX6 179 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 TFB2MQ9H5Q4 396 aaKnown RBP18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 LHX9Q9NQ69 397 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 CHRAC1Q9NRG0 131 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 LATS2Q9NRM7 1088 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 BFARQ9NZS9 450 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 KCND3Q9UK17 655 aa18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 MRPS18BQ9Y676 258 aaKnown RBP18.39■□□□□ 0.53
TMEM88B-201ENST00000378821 MYO18BQ8IUG5 2567 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 UBR5O95071 2799 aaPredicted RBP18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 UBA6A0AVT1 1052 aaPredicted RBP18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 C21orf140B9A014 251 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 AP3B1O00203 1094 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 MATN2O00339 956 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 AVILO75366 819 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 AP2A2O94973 939 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 WISP1O95388 367 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 GOT2P00505 430 aaKnown RBP18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 EBLN1P0CF75 366 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 PAFAH1B1P43034 410 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 TUBB4BP68371 445 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 NFKB2Q00653 900 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 TUBB2AQ13885 445 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 DBN1Q16643 649 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 AFTPHQ6ULP2 937 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 CAND1Q86VP6 1230 aaKnown RBP18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 PEX13Q92968 403 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 ZNF501Q96CX3 271 aaPredicted RBP18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 TUBB2BQ9BVA1 445 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 VPS37BQ9H9H4 285 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 C1GALT1Q9NS00 363 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 RNF14Q9UBS8 474 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 ASIC3Q9UHC3 531 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 LNPEPQ9UIQ6 1025 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 POMT2Q9UKY4 750 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 KCNMB2Q9Y691 235 aa18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 SETXQ7Z333 2677 aaKnown RBP18.38■□□□□ 0.53
TMEM88B-201ENST00000378821 SPTA1P02549 2419 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 GOLGA8MH3BSY2 632 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 NMBRP28336 390 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 CSRP3P50461 194 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 SARNPP82979 210 aaKnown RBP18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 RNASEH2BQ5TBB1 312 aaKnown RBP18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 PACS1Q6VY07 963 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 MPP5Q8N3R9 675 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 CLDN19Q8N6F1 224 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 NAT8LQ8N9F0 302 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 MCUQ8NE86 351 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 OR4E2Q8NGC2 313 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 SERPINB12Q96P63 405 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 GPR87Q9BY21 358 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 PITPNM3Q9BZ71 974 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 TWSG1Q9GZX9 223 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 MVB12BQ9H7P6 319 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 TREX1Q9NSU2 369 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 PCDHB3Q9Y5E6 796 aa18.37■□□□□ 0.53
TMEM88B-201ENST00000378821 CCDC188H7C350 402 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 CREG1O75629 220 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 FURINP09958 794 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 PDHA2P29803 388 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 PRAMEP78395 509 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 KCNC4Q03721 635 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 DNASE1L3Q13609 305 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 BOP1Q14137 746 aaKnown RBP18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 ITIH4Q14624 930 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 DEFB109BQ30KR1 87 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 ATP1A1-AS1Q5TC04 95 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 ARMC6Q6NXE6 501 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 OR6P1Q8NGX9 317 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 CT55Q8WUE5 264 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 SGSM3Q96HU1 749 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 C16orf45Q96MC5 204 aaPredicted RBP18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 LRFN5Q96NI6 719 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 RUNDC3BQ96NL0 473 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 KIFC1Q9BW19 673 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 CLMPQ9H6B4 373 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 AKIRIN1Q9H9L7 192 aaPredicted RBP18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 MRM3Q9HC36 420 aaKnown RBP18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 SYTL2Q9HCH5 934 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 SOX13Q9UN79 622 aa18.36■□□□□ 0.53
TMEM88B-201ENST00000378821 DNALI1O14645 258 aaPredicted RBP18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 LIN7AO14910 233 aaPredicted RBP18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 MLNP12872 115 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 POLR2CP19387 275 aaPredicted RBP18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 PRDX3P30048 256 aaKnown RBP18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 NSG1P42857 185 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 ARL4DP49703 201 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 DR1Q01658 176 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 SEMA3AQ14563 771 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 TMTC4Q5T4D3 741 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 CES3Q6UWW8 571 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 PPIL6Q8IXY8 311 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 OR4L1Q8NH43 312 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 LCN9Q8WX39 176 aa18.35■□□□□ 0.53
TMEM88B-201ENST00000378821 TFGQ92734 400 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms