RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 FAM155BO75949 473 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 C1orf105O95561 183 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 RPN2P04844 631 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 PROS1P07225 676 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 TPBGLP0DKB5 382 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 HOXB3P14651 431 aaPredicted RBP18.23■□□□□ 0.51
SSU72-203ENST00000378725 JUPP14923 745 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 MCM3P25205 808 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 SPRP35270 261 aaPredicted RBP18.23■□□□□ 0.51
SSU72-203ENST00000378725 PDX1P52945 283 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 LIMK2P53671 638 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 POU4F1Q01851 419 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 PRKG2Q13237 762 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 TMEM71Q6P5X7 295 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 RASGRP3Q8IV61 690 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 CPNE9Q8IYJ1 553 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 OR4D9Q8NGE8 314 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 OR52E1Q8NGJ3 308 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 GRAMD1AQ96CP6 724 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 FOPNLQ96NB1 174 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 DEPDC7Q96QD5 511 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 GPR22Q99680 433 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 NUDT22Q9BRQ3 303 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 RAB33BQ9H082 229 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 RDH14Q9HBH5 336 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 EPHA6Q9UF33 1036 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSU72-203ENST00000378725 NFS1Q9Y697 457 aa18.23■□□□□ 0.51
SSU72-203ENST00000378725 V9GYY5 206 aaPredicted RBP18.23■□□□□ 0.51
SSU72-203ENST00000378725 ASXL3Q9C0F0 2248 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 A0A087WUV0 522 aaPredicted RBP18.22■□□□□ 0.51
SSU72-203ENST00000378725 PSIP1O75475 530 aaKnown RBP18.22■□□□□ 0.51
SSU72-203ENST00000378725 AMD1P17707 334 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 CSF2RBP32927 897 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 TAS2R39P59534 338 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 TARDBPQ13148 414 aaKnown RBP eCLIP18.22■□□□□ 0.515e-10■□□□□ 10.2
SSU72-203ENST00000378725 PDAP1Q13442 181 aaKnown RBP18.22■□□□□ 0.51
SSU72-203ENST00000378725 ISXQ2M1V0 245 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 LRRC8EQ6NSJ5 796 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 KLHL35Q6PF15 583 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 SLITRK4Q8IW52 837 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 CFAP61Q8NHU2 1237 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 EEF1AKMT1Q8WVE0 214 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 JPH3Q8WXH2 748 aaPredicted RBP18.22■□□□□ 0.51
SSU72-203ENST00000378725 ASB11Q8WXH4 323 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 NCSTNQ92542 709 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 HGH1Q9BTY7 390 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 EPB41L4BQ9H329 900 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 SYNDIG1Q9H7V2 258 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 POPDC3Q9HBV1 291 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 SPTBN4Q9H254 2564 aa18.22■□□□□ 0.51
SSU72-203ENST00000378725 CNOT1A5YKK6 2376 aaKnown RBP18.22■□□□□ 0.51
SSU72-203ENST00000378725 GOLGA4Q13439 2230 aaKnown RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 MED19A0JLT2 244 aaPredicted RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 TMX2-CTNND1H3BSU7 103 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 GFYI3L273 518 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 CSO75390 466 aaKnown RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 WISP3O95389 354 aaPredicted RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 TSPAN12O95859 305 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 C9P02748 559 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 TYRP1P17643 537 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 CCKBRP32239 447 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 CCNFP41002 786 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 MAPK9P45984 424 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 CAPZBP47756 277 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 RGS4P49798 205 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 PGGT1BP53609 377 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 SHC2P98077 582 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 GRB7Q14451 532 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 PLCL1Q15111 1095 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 TMEM207Q6UWW9 146 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 PLXDC1Q8IUK5 500 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 CEP97Q8IW35 865 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 DCUN1D3Q8IWE4 304 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 OR4E2Q8NGC2 313 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 SKA2Q8WVK7 121 aaPredicted RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 SLC44A1Q8WWI5 657 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 LCN9Q8WX39 176 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 RSC1A1Q92681 617 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 PDLIM5Q96HC4 596 aaKnown RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 TMEM74Q96NL1 305 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 MENTQ9BUN1 341 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 SCNM1Q9BWG6 230 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 PARD6BQ9BYG5 372 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 TWSG1Q9GZX9 223 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 SEMA6CQ9H3T2 930 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 RUVBL2Q9Y230 463 aaKnown RBP18.21■□□□□ 0.51
SSU72-203ENST00000378725 ENTPD2Q9Y5L3 495 aa18.21■□□□□ 0.51
SSU72-203ENST00000378725 COL27A1Q8IZC6 1860 aaPredicted RBP18.2■□□□□ 0.5
SSU72-203ENST00000378725 IGHV5-10-1A0A0J9YXX1 117 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 FAM149AA5PLN7 773 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 OR5K3A6NET4 321 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 KDM1AO60341 852 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 ITGA2BP08514 1039 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 INHBCP55103 352 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 IL2P60568 153 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 SLC29A2Q14542 456 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 USP10Q14694 798 aaKnown RBP18.2■□□□□ 0.5
SSU72-203ENST00000378725 MAP9Q49MG5 647 aa18.2■□□□□ 0.5
SSU72-203ENST00000378725 TTC23LQ6PF05 361 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms