RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TERF1P54274 439 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 NFATC3Q12968 1075 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 IL11RAQ14626 422 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 PPP1R7Q15435 360 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 TBR1Q16650 682 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 MRNIPQ6NTE8 343 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 SYDE1Q6ZW31 735 aaPredicted RBP16.52■□□□□ 0.23
RER1-202ENST00000378512 HOOK3Q86VS8 718 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 TBC1D21Q8IYX1 336 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 PHC3Q8NDX5 983 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 OR5K2Q8NHB8 316 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 ASZ1Q8WWH4 475 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 MAP3K3Q99759 626 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 TSSK1BQ9BXA7 367 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 POMT2Q9UKY4 750 aa16.52■□□□□ 0.23
RER1-202ENST00000378512 ASH1LQ9NR48 2969 aaKnown RBP16.51■□□□□ 0.23
RER1-202ENST00000378512 OR6C74A6NCV1 312 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 IQCF5A8MTL0 148 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 GOLGA8MH3BSY2 632 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 CCDC188H7C350 402 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 POLR1CO15160 346 aaPredicted RBP16.51■□□□□ 0.23
RER1-202ENST00000378512 RASSF9O75901 435 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 USP1O94782 785 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 DLGAP3O95886 979 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 FGF5P12034 268 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 LIFP15018 202 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 PAMP19021 973 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 SEPHS1P49903 392 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 KPNA2P52292 529 aaKnown RBP16.51■□□□□ 0.23
RER1-202ENST00000378512 SH3BP2P78314 561 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 GBX1Q14549 363 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 CTSL3PQ5NE16 218 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 RNF187Q5TA31 235 aaPredicted RBP16.51■□□□□ 0.23
RER1-202ENST00000378512 NAPRTQ6XQN6 538 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 CENPUQ71F23 418 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 PCGF5Q86SE9 256 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 CILP2Q8IUL8 1156 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 VRK3Q8IV63 474 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 ADGRF3Q8IZF5 1079 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 OR4E2Q8NGC2 313 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 OR5AR1Q8NGP9 310 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 CAPZA3Q96KX2 299 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 RUNDC3BQ96NL0 473 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 LATS2Q9NRM7 1088 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 SAMD15Q9P1V8 674 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 GNPTGQ9UJJ9 305 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 BTRCQ9Y297 605 aa16.51■□□□□ 0.23
RER1-202ENST00000378512 GOLGA8KD6RF30 607 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 GOLGA8TH3BQL2 631 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 BTN3A3O00478 584 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 TP73O15350 636 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 ITGB6P18564 788 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 DHX34Q14147 1143 aaKnown RBP16.5■□□□□ 0.23
RER1-202ENST00000378512 MAP7Q14244 749 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 KRT33BQ14525 404 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 BRD3Q15059 726 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
RER1-202ENST00000378512 NEPROQ6NW34 567 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 SDCCAG8Q86SQ7 713 aaPredicted RBP16.5■□□□□ 0.23
RER1-202ENST00000378512 D2HGDHQ8N465 521 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 LCN9Q8WX39 176 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 PANX3Q96QZ0 392 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 NRTNQ99748 197 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 MENTQ9BUN1 341 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 SLC12A9Q9BXP2 914 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 PITPNM3Q9BZ71 974 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 SRMSQ9H3Y6 488 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 C1GALT1Q9NS00 363 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 POLG2Q9UHN1 485 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 ICKQ9UPZ9 632 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 RPS6KL1Q9Y6S9 549 aa16.5■□□□□ 0.23
RER1-202ENST00000378512 BTN3A1O00481 513 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 KPNA5O15131 536 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 SLC28A2O43868 658 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 NDUFS3O75489 264 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 MSL3P1P0C860 447 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 POLR2CP19387 275 aaPredicted RBP16.49■□□□□ 0.23
RER1-202ENST00000378512 HSPA14Q0VDF9 509 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 CBLBQ13191 982 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 SYTL3Q4VX76 610 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 DNAJC21Q5F1R6 531 aaKnown RBP16.49■□□□□ 0.23
RER1-202ENST00000378512 CASC4Q6P4E1 433 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 TIPARPQ7Z3E1 657 aaKnown RBP16.49■□□□□ 0.23
RER1-202ENST00000378512 PRICKLE2Q7Z3G6 844 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 AMIGO1Q86WK6 493 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 LMNTD2Q8IXW0 634 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 ZNF669Q96BR6 464 aaPredicted RBP16.49■□□□□ 0.23
RER1-202ENST00000378512 FCRL4Q96PJ5 515 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 OR6C1Q96RD1 312 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 ARHGAP9Q9BRR9 750 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 HGH1Q9BTY7 390 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 TRIM4Q9C037 500 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 TRIT1Q9H3H1 467 aaKnown RBP16.49■□□□□ 0.23
RER1-202ENST00000378512 INTS10Q9NVR2 710 aaKnown RBP16.49■□□□□ 0.23
RER1-202ENST00000378512 ASIC3Q9UHC3 531 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 ASF1AQ9Y294 204 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
RER1-202ENST00000378512 SMAPO00193 183 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms