RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SYN3O14994 580 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 NDST3O95803 873 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 IGFBP5P24593 272 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 NMBRP28336 390 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CARD17Q5XLA6 110 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 XYLT1Q86Y38 959 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 ENY2Q9NPA8 101 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 HPSEQ9Y251 543 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CLUHO75153 1309 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 PAX3P23760 479 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 VPS26BQ4G0F5 336 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 HSDL2Q6YN16 418 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CDK15Q96Q40 435 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 PLEKHA6Q9Y2H5 1048 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 INSL6Q9Y581 213 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 MYBPHLA2RUH7 354 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 FADS2P1A8MWK0 482 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 NPIPA5E9PKD4 350 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 MTTPP55157 894 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 OR2T12Q8NG77 320 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 NPIPA1Q9UND3 350 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 GOLGA4Q13439 2230 aaKnown RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 NRP1O14786 923 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CLCNKAP51800 687 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 FIGNQ5HY92 759 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 FAM71AQ8IYT1 594 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CCDC120Q96HB5 630 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CSPG4P5Q96PW8 444 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CPXM1Q96SM3 734 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 MGME1Q9BQP7 344 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CACNA1FO60840 1977 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 NEMP2A6NFY4 417 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 ITGA5P08648 1049 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 ZBTB48P10074 688 aaPredicted RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 HLA-EP13747 358 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 PPIBP23284 216 aaKnown RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 MAP3K8P41279 467 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 ADARP55265 1226 aaKnown RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 SRYQ05066 204 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CPNE9Q8IYJ1 553 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 OR5AK3PQ8NH89 298 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 GFM1Q96RP9 751 aaKnown RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 WDR55Q9H6Y2 383 aaPredicted RBP13.88□□□□□ -0.19
TRIM13-202ENST00000378182 MEAF6Q9HAF1 191 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 A0A1W2PPL8 197 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 KCNU1A8MYU2 1149 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CFHP08603 1231 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CDH12P55289 794 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 CLNKQ7Z7G1 428 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 TNFAIP8L1Q8WVP5 186 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 TCF7L1Q9HCS4 588 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 SH3BGRL2Q9UJC5 107 aa13.88□□□□□ -0.19
TRIM13-202ENST00000378182 C5orf51A6NDU8 294 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 OAZ2O95190 189 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 CHRNA1P02708 482 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 FOXK1P85037 733 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 SIM2Q14190 667 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 HEPACAMQ14CZ8 416 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 FIP1L1Q6UN15 594 aaKnown RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 DNAJB7Q7Z6W7 309 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 TMEM192Q8IY95 271 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 DNAJA4Q8WW22 397 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF285Q96NJ3 590 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 GKN1Q9NS71 199 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 RAPGEFL1Q9UHV5 662 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 A0A1W2PPM1 405 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 E7EQ34 232 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 PIM1P11309 404 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 KHKP50053 298 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 DLG3Q92796 817 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 PHF12Q96QT6 1004 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 MALT1Q9UDY8 824 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 IRGMA1A4Y4 181 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 J3QRK9 145 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 MPIP34949 423 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 CARD16Q5EG05 197 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 IDNKQ5T6J7 187 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 DENND5AQ6IQ26 1287 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 NLGN4YQ8NFZ3 816 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 TRMT10AQ8TBZ6 339 aaKnown RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 MMADHCQ9H3L0 296 aaPredicted RBP13.87□□□□□ -0.19
TRIM13-202ENST00000378182 GLS2Q9UI32 602 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 L7N2F9 121 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 PLSCR1O15162 318 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 VAMP2P63027 116 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 NOMO3P69849 1222 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 KBTBD8Q8NFY9 601 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 LGR4Q9BXB1 951 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 LHX5Q9H2C1 402 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 ANKZF1Q9H8Y5 726 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 SDHAF3Q9NRP4 125 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 LAMTOR5O43504 91 aa13.87□□□□□ -0.19
TRIM13-202ENST00000378182 ZNF41P51814 821 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms