RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ATG9BQ674R7 924 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 GPR142Q7Z601 462 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CHERPQ8IWX8 916 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 SCML4Q8N228 414 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 OR52L1Q8NGH7 329 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PIWIL1Q96J94 861 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PCYT2Q99447 389 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CNPPD1Q9BV87 410 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 OR2B2Q9GZK3 357 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 SGK2Q9HBY8 427 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 AKAP7Q9P0M2 348 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RPS6KB2Q9UBS0 482 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RNF6Q9Y252 685 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ZCWPW2A0A1B0GU75 182 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 FAM240BA0A1B0GVZ2 78 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 MYBPHLA2RUH7 354 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ORC5O43913 435 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 SRPRAP08240 638 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CLCNKBP51801 687 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 WNT7BP56706 349 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RELAQ04206 551 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ABHD18Q0P651 414 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RFTN2Q52LD8 501 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 USP39Q53GS9 565 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CXXC5Q7LFL8 322 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 MAPK15Q8TD08 544 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 CDCA5Q96FF9 252 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF382Q96SR6 550 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 POLR3BQ9NW08 1133 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 MRPL39Q9NYK5 338 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 SPG21Q9NZD8 308 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 RUVBL1Q9Y265 456 aaKnown RBP8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PCDHGB3Q9Y5G1 929 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 NHSQ6T4R5 1651 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 ANKDD1BA6NHY2 528 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 EPORP19235 508 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 BRCC3P46736 316 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 STC1P52823 247 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 IL18Q14116 193 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 NOMO2Q5JPE7 1267 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 LRRC70Q7Z2Q7 622 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PEX5LQ8IYB4 626 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 USP7Q93009 1102 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 TCF25Q9BQ70 676 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 FAIM2Q9BWQ8 316 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 EXD2Q9NVH0 621 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 GRIP1Q9Y3R0 1128 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 PCDHGA10Q9Y5H3 936 aa8.62□□□□□ -1.03
PCDH9-202ENST00000377865 FAM172BPA6NC97 362 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PRORSD1PA6NEY8 169 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PIRO00625 290 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TPD52L2O43399 206 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SSNA1O43805 119 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TLR5O60602 858 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 AP2A2O94973 939 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CTPS1P17812 591 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 IQCCQ4KMZ1 466 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CHADLQ6NUI6 762 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF517Q6ZMY9 492 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PLEKHG7Q6ZR37 379 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TRMT11Q7Z4G4 463 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 GOLGA7Q7Z5G4 137 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PIM3Q86V86 326 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CEP97Q8IW35 865 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CMTR2Q8IYT2 770 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TMEM74Q96NL1 305 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 YME1L1Q96TA2 773 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ZNF510Q9Y2H8 683 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 RPL36Q9Y3U8 105 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 A0A0G2JLL6 359 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 H7C0S8 307 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 FFAR2O15552 330 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CKMP06732 381 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 MYCLP1P12525 358 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 MAGP20916 626 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PRPS1L1P21108 318 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 DCKP27707 260 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 FEN1P39748 380 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 LAPTM5Q13571 262 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 CARTPTQ16568 116 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 DUOXA1Q1HG43 343 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 TMEM44Q2T9K0 475 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PRRT2Q7Z6L0 340 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 KDM1BQ8NB78 822 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 BHMTQ93088 406 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 LRCH3Q96II8 777 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 NLE1Q9NVX2 485 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 FAM118AQ9NWS6 357 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 ENTPD4Q9Y227 616 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 KCNE2Q9Y6J6 123 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SCAMP3O14828 347 aaKnown RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 PPEF2O14830 753 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 NOS1APO75052 506 aaPredicted RBP8.61□□□□□ -1.03
PCDH9-202ENST00000377865 MAGEA3P43357 314 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 SLC15A1P46059 708 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 AP1S1P61966 158 aa8.61□□□□□ -1.03
PCDH9-202ENST00000377865 NFKB2Q00653 900 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms