RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 DNAJC5Q9H3Z4 198 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MED11Q9P086 117 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SULT1B1O43704 296 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 DLG2Q15700 870 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OR52L1Q8NGH7 329 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PELOQ9BRX2 385 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ATG13O75143 517 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ARF4P18085 180 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 EIF2B2P49770 351 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 THOC7Q6I9Y2 204 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF621Q6ZSS3 439 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 EPYCQ99645 322 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 LRTM1Q9HBL6 345 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ANKRD66B4E2M5 251 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 APBB3O95704 486 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 GNAO1P09471 354 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MAP2K5Q13163 448 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZFP69Q49AA0 526 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 COLEC12Q5KU26 742 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MED27Q6P2C8 311 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HPS6Q86YV9 775 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CPB2Q96IY4 423 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MBLAC1A4D2B0 266 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 C6orf136Q5SQH8 315 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CREB3L2Q70SY1 520 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 AMZ2Q86W34 360 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SDR16C5Q8N3Y7 309 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OR8J2Q8NGG1 315 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SLA2Q9H6Q3 261 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CRLS1Q9UJA2 301 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CBX2Q14781 532 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 IL27RAQ6UWB1 636 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 LIX1LQ8IVB5 337 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF567Q8N184 647 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HIPK4Q8NE63 616 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SEMA4DQ92854 862 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 TFRCP02786 760 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 EPCAMP16422 314 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ACVR1Q04771 509 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 TEX26Q8N6G2 289 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CD244Q9BZW8 370 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SCML1Q9UN30 329 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ITGAMP11215 1152 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 GPX6P59796 221 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NIPAL4Q0D2K0 466 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 USP4Q13107 963 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SLC25A30Q5SVS4 291 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 FNBP1LQ5T0N5 605 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ZNF697Q5TEC3 545 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SLC4A9Q96Q91 983 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 REXO4Q9GZR2 422 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 DDX28Q9NUL7 540 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 WWOXQ9NZC7 414 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 TRPV2Q9Y5S1 764 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CLCA1A8K7I4 914 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PRAMEF11O60813 436 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 AHSGP02765 367 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ALDOAP04075 364 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PGRP06401 933 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SLC1A2P43004 574 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CLK3P49761 638 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NHSL2Q5HYW2 709 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 EEPD1Q7L9B9 569 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 POLMQ9NP87 494 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OAS3Q9Y6K5 1087 aaKnown RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 LY86O95711 162 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 C21orf58P58505 322 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MCUBQ9NWR8 336 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HIST1H2ABP04908 130 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 STX4Q12846 297 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HIST3H2AQ7L7L0 130 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 RASAL3Q86YV0 1011 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OR4C6Q8NH72 309 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HIST1H2ACQ93077 130 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NMRK2Q9NPI5 230 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CLDN4O14493 209 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 LRG1P02750 347 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MNDAP41218 407 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CRISP3P54108 245 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 KCNA1Q09470 495 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 FAM46DQ8NEK8 389 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CCDC54Q8NEL0 328 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HOXD1Q9GZZ0 328 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 SLC17A7Q9P2U7 560 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 C17orf113A0A1B0GUU1 675 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 A0A1B0GVC2 190 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 TTC24A2A3L6 582 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 CTBP2P56545 445 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 NPTX1Q15818 432 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 FBXO32Q969P5 355 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PRRG1O14668 218 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 HCN1O60741 890 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PPM1BO75688 479 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 PET100P0DJ07 73 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 ERVK-10P10266 1014 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 FKBP14Q9NWM8 211 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 XPR1Q9UBH6 696 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 COL1A1P02452 1464 aaPredicted RBP4.85□□□□□ -1.63
PCDH9-201ENST00000377861 MFSD10Q14728 455 aa4.85□□□□□ -1.63
PCDH9-201ENST00000377861 OR52K1Q8NGK4 314 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms