RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 TDRKHQ9Y2W6 561 aaKnown RBP21.49■■□□□ 1.03
SRM-201ENST00000376957 USP1O94782 785 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 ESR1P03372 595 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 MT-ND3P03897 115 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 CCR7P32248 378 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 CSE1LP55060 971 aaKnown RBP21.48■■□□□ 1.03
SRM-201ENST00000376957 ADARP55265 1226 aaKnown RBP21.48■■□□□ 1.03
SRM-201ENST00000376957 TUBB3Q13509 450 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 LONRF1Q17RB8 773 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 ANKRD20A4Q4UJ75 823 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 MICALCLQ6ZW33 695 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 TMEM135Q86UB9 458 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 SLC22A15Q8IZD6 547 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 RAB42Q8N4Z0 105 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 OR8K5Q8NH50 307 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 NKD1Q969G9 470 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 CRELD1Q96HD1 420 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 FCRL4Q96PJ5 515 aa21.48■■□□□ 1.03
SRM-201ENST00000376957 INTS10Q9NVR2 710 aaKnown RBP21.48■■□□□ 1.03
SRM-201ENST00000376957 IGHV5-51A0A0C4DH38 117 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 PIPSLA2A3N6 862 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 BHMG1C9JSJ3 638 aaPredicted RBP21.47■■□□□ 1.03
SRM-201ENST00000376957 E5RI56 91 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 DNALI1O14645 258 aaPredicted RBP21.47■■□□□ 1.03
SRM-201ENST00000376957 RAD1O60671 282 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 STK17BO94768 372 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 TTC4O95801 387 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 CCNYL3P0C7X3 344 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 FGF5P12034 268 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 AOAHP28039 575 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 ACADLP28330 430 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 MAP7Q14244 749 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 TYSND1Q2T9J0 566 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.47■■□□□ 1.03
SRM-201ENST00000376957 RNASEH2BQ5TBB1 312 aaKnown RBP21.47■■□□□ 1.03
SRM-201ENST00000376957 UNC5DQ6UXZ4 953 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 ESX1Q8N693 406 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 OR5AR1Q8NGP9 310 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 MAGEC3Q8TD91 643 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 STAMBPL1Q96FJ0 436 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 P2RY12Q9H244 342 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 SYTL2Q9HCH5 934 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 APMAPQ9HDC9 416 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 KCND1Q9NSA2 647 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 OR6C2Q9NZP2 312 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 PILRAQ9UKJ1 303 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 POMT2Q9UKY4 750 aa21.47■■□□□ 1.03
SRM-201ENST00000376957 TMEM184BQ9Y519 407 aaPredicted RBP21.47■■□□□ 1.03
SRM-201ENST00000376957 IQCF5A8MTL0 148 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 GOLGA8KD6RF30 607 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 GOLGA8TH3BQL2 631 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 CHRM3P20309 590 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 PRDX3P30048 256 aaKnown RBP21.46■■□□□ 1.03
SRM-201ENST00000376957 CASQ1P31415 396 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 FMO4P31512 558 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 ARCN1P48444 511 aaKnown RBP21.46■■□□□ 1.03
SRM-201ENST00000376957 KPNA2P52292 529 aaKnown RBP21.46■■□□□ 1.03
SRM-201ENST00000376957 SH3BP2P78314 561 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 PLEKHS1Q5SXH7 462 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 IZUMO3Q5VZ72 239 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 NAPRTQ6XQN6 538 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 CILP2Q8IUL8 1156 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 PDIK1LQ8N165 341 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 KRT222Q8N1A0 295 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 LSM14AQ8ND56 463 aaKnown RBP21.46■■□□□ 1.03
SRM-201ENST00000376957 PMEPA1Q969W9 287 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 FAM167BQ9BTA0 163 aa21.46■■□□□ 1.03
SRM-201ENST00000376957 C20orf96Q9NUD7 363 aaPredicted RBP21.46■■□□□ 1.03
SRM-201ENST00000376957 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.46■■□□□ 1.032e-12■■□□□ 12
SRM-201ENST00000376957 FAM208BQ5VWN6 2430 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 ERVH48-1M5A8F1 160 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 GPC4O75487 556 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 SLCO2B1O94956 709 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 PGAM1P18669 254 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 ARNTP27540 789 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 MAGEA3P43357 314 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 PPP1CAP62136 330 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 TUBB4BP68371 445 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 ABHD18Q0P651 414 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 TUBB2AQ13885 445 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 MORF4L2Q15014 288 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 KCTD19Q17RG1 926 aaPredicted RBP21.45■■□□□ 1.02
SRM-201ENST00000376957 ZNF470Q6ECI4 717 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 D2HGDHQ8N465 521 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.45■■□□□ 1.029e-8■■■■□ 25.4
SRM-201ENST00000376957 SLC22A18Q96BI1 424 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 ELMO2Q96JJ3 720 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 TUBB2BQ9BVA1 445 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 RAB11FIP5Q9BXF6 653 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 GPN2Q9H9Y4 310 aaPredicted RBP21.45■■□□□ 1.02
SRM-201ENST00000376957 FGF21Q9NSA1 209 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 CRYL1Q9Y2S2 319 aa21.45■■□□□ 1.02
SRM-201ENST00000376957 BTN3A1O00481 513 aa21.44■■□□□ 1.02
SRM-201ENST00000376957 EFSO43281 561 aa21.44■■□□□ 1.02
SRM-201ENST00000376957 ABRQ12979 859 aa21.44■■□□□ 1.02
SRM-201ENST00000376957 TTLL9Q3SXZ7 439 aa21.44■■□□□ 1.02
SRM-201ENST00000376957 TAF1BQ53T94 588 aaPredicted RBP21.44■■□□□ 1.02
SRM-201ENST00000376957 C6orf15Q6UXA7 325 aaPredicted RBP21.44■■□□□ 1.02
SRM-201ENST00000376957 VASH2Q86V25 355 aa21.44■■□□□ 1.02
SRM-201ENST00000376957 DCUN1D3Q8IWE4 304 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms