RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 INPP5AQ14642 412 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 XKR5Q6UX68 686 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SCUBE1Q8IWY4 988 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 HIST1H2AHQ96KK5 128 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 HIST1H2AJQ99878 128 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 H2AFJQ9BTM1 129 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 KLQ9UEF7 1012 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SLC7A8Q9UHI5 535 aa12.31□□□□□ -0.44
CLCN6-206ENST00000376496 SLC5A10A0PJK1 596 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 GFYI3L273 518 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 LATO43561 262 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 PRAMEF4O60810 478 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 POP7O75817 140 aaKnown RBP12.3□□□□□ -0.44
CLCN6-206ENST00000376496 THRAP10827 490 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 TSTA3Q13630 321 aaPredicted RBP12.3□□□□□ -0.44
CLCN6-206ENST00000376496 SNCBQ16143 134 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 CPSF6Q16630 551 aaKnown RBP eCLIP12.3□□□□□ -0.44
CLCN6-206ENST00000376496 PRAMEF9Q5VWM5 478 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 ZNF776Q68DI1 518 aaPredicted RBP12.3□□□□□ -0.44
CLCN6-206ENST00000376496 Q6ZSR9 355 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 NLRP8Q86W28 1048 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 RNF175Q8N4F7 328 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 TEX37Q96LM6 180 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 NECTIN4Q96NY8 510 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 SLC23A2Q9UGH3 650 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 TMCO1Q9UM00 188 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 PSMD13Q9UNM6 376 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 C8GP07360 202 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 C5AR1P21730 350 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 HMOX2P30519 316 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 NEK2P51955 445 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 PKNOX1P55347 436 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 HMGCS1Q01581 520 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 PNCKQ6P2M8 343 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 TRMT11Q7Z4G4 463 aaKnown RBP12.3□□□□□ -0.44
CLCN6-206ENST00000376496 HPS6Q86YV9 775 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 FUNDC1Q8IVP5 155 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 SFRP1Q8N474 314 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 HIC2Q96JB3 615 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 CAAP1Q9H8G2 361 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 RDH14Q9HBH5 336 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 TRIM39Q9HCM9 518 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 LMCD1Q9NZU5 365 aa12.3□□□□□ -0.44
CLCN6-206ENST00000376496 CFAP20Q9Y6A4 193 aaKnown RBP12.3□□□□□ -0.44
CLCN6-206ENST00000376496 FBP2O00757 339 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 OTCP00480 354 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 MPC1LP0DKB6 136 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 EPB42P16452 691 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 LBPP18428 481 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 DPP6P42658 865 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 ATXN3P54252 364 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 DPTQ07507 201 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 TBL3Q12788 808 aaKnown RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 SQLEQ14534 574 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 IRF4Q15306 451 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 PREPLQ4J6C6 727 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 DSELQ8IZU8 1212 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 C2orf73Q8N5S3 287 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 HIPK4Q8NE63 616 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 OR2T3Q8NH03 318 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 RP9Q8TA86 221 aaKnown RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 DTX3LQ8TDB6 740 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 MED8Q96G25 268 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 TRIM54Q9BYV2 358 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 KLHL42Q9P2K6 505 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 CA5BQ9Y2D0 317 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 A0A1W2PQU0 124 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 H3BM21 787 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 NR5A2O00482 541 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 SLC31A1O15431 190 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 MATN4O95460 622 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 CHEK2O96017 543 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 GPX3P22352 226 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 STARD3Q14849 445 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 E2F5Q15329 346 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 DNAL1Q4LDG9 190 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 XKR7Q5GH72 579 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 RPLP0P6Q8NHW5 317 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 RAB7BQ96AH8 199 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 SLC39A3Q9BRY0 314 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 RTKNQ9BST9 563 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 ACTR8Q9H981 624 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 IL1RL2Q9HB29 575 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 NDRG2Q9UN36 371 aaKnown RBP12.29□□□□□ -0.44
CLCN6-206ENST00000376496 ST14Q9Y5Y6 855 aa12.29□□□□□ -0.44
CLCN6-206ENST00000376496 TBC1D3DA0A087WVF3 549 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 TBC1D3IA0A087WXS9 549 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 TBC1D3EA0A087X179 549 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 TBC1D3KA0A087X1G2 549 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 PABPN1LA6NDY0 278 aaKnown RBP12.28□□□□□ -0.44
CLCN6-206ENST00000376496 TBC1D3FA6NER0 549 aaPredicted RBP12.28□□□□□ -0.44
CLCN6-206ENST00000376496 TBC1D3LB9A6J9 549 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 KPNA5O15131 536 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 ADH1BP00325 375 aa12.28□□□□□ -0.44
CLCN6-206ENST00000376496 DNTTP04053 509 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms