RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 EFHD2Q96C19 240 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 PYCR2Q96C36 320 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 PCDHB14Q9Y5E9 798 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 GSTA4O15217 222 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC22A1O15245 554 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 TSPAN9O75954 239 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 RHOBTB1O94844 696 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ANGPTL1O95841 491 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 GNRH1P01148 92 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 UROSP10746 265 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 SUOXP51687 545 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ILF2Q12905 390 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 GBX1Q14549 363 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 COLEC12Q5KU26 742 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 TIGD7Q6NT04 549 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 LETMD1Q6P1Q0 360 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 GALNT7Q86SF2 657 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 P2RY8Q86VZ1 359 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 LYSMD2Q8IV50 215 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 MINDY2Q8NBR6 621 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 OR2T12Q8NG77 320 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 RBM4BQ9BQ04 359 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 AARSD1Q9BTE6 412 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 THUMPD3Q9BV44 507 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 RBM4Q9BWF3 364 aaKnown RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 B3GNT4Q9C0J1 378 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 TP63Q9H3D4 680 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 DSN1Q9H410 356 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 OSER1Q9NX31 292 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 MKL2Q9ULH7 1088 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 POLR3HQ9Y535 204 aaPredicted RBP11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
TM9SF2-201ENST00000376387 BTN3A1O00481 513 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 BCKDKO14874 412 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 TBX1O43435 398 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MLYCDO95822 493 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 AGR2O95994 175 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MT-ND2P03891 347 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ZNF135P52742 658 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ADAM17P78536 824 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 PTGR1Q14914 329 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 CLCA4Q14CN2 919 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 RFTN2Q52LD8 501 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 VASH1Q7L8A9 365 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 DPP10Q8N608 796 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 RTL3Q8N8U3 475 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ZNF548Q8NEK5 533 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC22A8Q8TCC7 542 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 BCL7CQ8WUZ0 217 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 UPF1Q92900 1129 aaKnown RBP eCLIP11.29□□□□□ -0.63e-8■■■□□ 17
TM9SF2-201ENST00000376387 CLSTN3Q9BQT9 956 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MAGEE1Q9HCI5 957 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SLC6A13Q9NSD5 602 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 THG1LQ9NWX6 298 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 CAB39Q9Y376 341 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 BRCA2P51587 3418 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ARVCFO00192 962 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 PRKACAP17612 351 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 RPL17P18621 184 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 GTF2E2P29084 291 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 EPHA2P29317 976 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SERPINB1P30740 379 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SP140Q13342 867 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ALFQ53S48 1182 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 STEAP3Q658P3 488 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 CYP20A1Q6UW02 462 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 DET1Q7L5Y6 550 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 CYP4Z1Q86W10 505 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ARRDC2Q8TBH0 407 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SMARCD1Q96GM5 515 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 DACH2Q96NX9 599 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 GPR21Q99679 349 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MIOSQ9NXC5 875 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.29□□□□□ -0.67e-9■□□□□ 9.4
TM9SF2-201ENST00000376387 ASB14A6NK59 587 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 LCKP06239 509 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MMP3P08254 477 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SMPD1P17405 629 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 S100A1P23297 94 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 HNRNPFP52597 415 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 PIK3R6Q5UE93 754 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MARC1Q5VT66 337 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 AKAP14Q86UN6 197 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 MSRB3Q8IXL7 192 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 RHOXF1Q8NHV9 184 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 PHF10Q8WUB8 498 aaKnown RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 FAM162AQ96A26 154 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 UGT2B28Q9BY64 529 aa11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 ZBTB20Q9HC78 741 aaPredicted RBP11.29□□□□□ -0.6
TM9SF2-201ENST00000376387 NECTIN3Q9NQS3 549 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms