RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CA5AP35218 305 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 TUFMP49411 452 aaKnown RBP14.27□□□□□ -0.13
MSH5-201ENST00000375703 EPS8Q12929 822 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 PHKG1Q16816 387 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 MEP1AQ16819 746 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 SMU1Q2TAY7 513 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 INO80DQ53TQ3 878 aaPredicted RBP14.27□□□□□ -0.13
MSH5-201ENST00000375703 RUNDC3AQ59EK9 446 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 C6orf141Q5SZD1 244 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 DNAJC14Q6Y2X3 702 aaPredicted RBP14.27□□□□□ -0.13
MSH5-201ENST00000375703 FKBP9P1Q75LS8 142 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 TMEM173Q86WV6 379 aaPredicted RBP14.27□□□□□ -0.13
MSH5-201ENST00000375703 RBFAQ8N0V3 343 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 SPARTQ8N0X7 666 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 SVOPLQ8N434 492 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 KRTCAP2Q8N6L1 136 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 LKAAEAR1Q8TD35 194 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 SGCDQ92629 289 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 SLC25A37Q9NYZ2 338 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 PRSS21Q9Y6M0 314 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 FRMPD3Q5JV73 1810 aa14.27□□□□□ -0.13
MSH5-201ENST00000375703 BCL10O95999 233 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 INHBBP09529 407 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 RPL17P18621 184 aaKnown RBP14.26□□□□□ -0.13
MSH5-201ENST00000375703 RPS3P23396 243 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH5-201ENST00000375703 GSTM2P28161 218 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 PPP1R8Q12972 351 aaKnown RBP14.26□□□□□ -0.13
MSH5-201ENST00000375703 SPESP1Q6UW49 350 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 GCNT7Q6ZNI0 430 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 MSRB3Q8IXL7 192 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 RGL4Q8IZJ4 473 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 DDHD1Q8NEL9 900 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 OVCA2Q8WZ82 227 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 MTFMTQ96DP5 389 aaKnown RBP14.26□□□□□ -0.13
MSH5-201ENST00000375703 PLEKHA8Q96JA3 519 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 OR52E6Q96RD3 313 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 MBOAT4Q96T53 435 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 RBM4BQ9BQ04 359 aaKnown RBP14.26□□□□□ -0.13
MSH5-201ENST00000375703 FEM1AQ9BSK4 669 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 RBM4Q9BWF3 364 aaKnown RBP14.26□□□□□ -0.13
MSH5-201ENST00000375703 AMBRA1Q9C0C7 1298 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 LRTM1Q9HBL6 345 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 TRPM5Q9NZQ8 1165 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 LOC730098B7Z3J9 87 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 TBL1XO60907 577 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 GALTP07902 379 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 OR1D2P34982 312 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 BMXP51813 675 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 ANKRD34AQ69YU3 496 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 TRIM46Q7Z4K8 759 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 GALNT13Q8IUC8 556 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 PHACTR4Q8IZ21 702 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 RAB2BQ8WUD1 216 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 PIH1D2Q8WWB5 315 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 UPF1Q92900 1129 aaKnown RBP eCLIP14.26□□□□□ -0.13
MSH5-201ENST00000375703 ULK4Q96C45 1275 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 RHBDF1Q96CC6 855 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 CCDC138Q96M89 665 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 CLMPQ9H6B4 373 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 ELAC1Q9H777 363 aaKnown RBP14.26□□□□□ -0.13
MSH5-201ENST00000375703 ZFYVE1Q9HBF4 777 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 PSME2Q9UL46 239 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 LRFN2Q9ULH4 789 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 PDE10AQ9Y233 779 aa14.26□□□□□ -0.13
MSH5-201ENST00000375703 K7EPI3 171 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PRKACGP22612 351 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PIGAP37287 484 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PPP2R2BQ00005 443 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 KCNAB2Q13303 367 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PON2Q15165 354 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 C16orf87Q6PH81 154 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 SNX20Q7Z614 316 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 ADHFE1Q8IWW8 467 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 MICU2Q8IYU8 434 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PAF1Q8N7H5 531 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 CHDHQ8NE62 594 aaPredicted RBP14.25□□□□□ -0.13
MSH5-201ENST00000375703 NCLNQ969V3 563 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 MAGED4Q96JG8 741 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 USE1Q9NZ43 259 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 GAPDHSO14556 408 aaPredicted RBP14.25□□□□□ -0.13
MSH5-201ENST00000375703 SCAMP3O14828 347 aaKnown RBP14.25□□□□□ -0.13
MSH5-201ENST00000375703 CREG1O75629 220 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 WDR47O94967 919 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PGLSO95336 258 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 EBLN1P0CF75 366 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 EPB42P16452 691 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 NFATC2Q13469 925 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 BFSP2Q13515 415 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 GTDC1Q4AE62 458 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 SUSD1Q6UWL2 747 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 ZBTB46Q86UZ6 589 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 ZBTB2Q8N680 514 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 DBF4BQ8NFT6 615 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 PJA1Q8NG27 643 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 OR52E4Q8NGH9 312 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 OR6K2Q8NGY2 324 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 CLHC1Q8NHS4 586 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 MYO19Q96H55 970 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 NTMT1Q9BV86 223 aa14.25□□□□□ -0.13
MSH5-201ENST00000375703 TM6SF2Q9BZW4 377 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms