RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TFEBP19484 476 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 HK3P52790 923 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 SLC18A1P54219 525 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 RPA4Q13156 261 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 ACAP2Q15057 778 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 COL28A1Q2UY09 1125 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 CCDC153Q494R4 210 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 C16orf46Q6P387 395 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 FAM83HQ6ZRV2 1179 aaPredicted RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 NEK10Q6ZWH5 1172 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 MTERF4Q7Z6M4 381 aaKnown RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 PHACTR4Q8IZ21 702 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 SLC22A15Q8IZD6 547 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 LILRA3Q8N6C8 439 aaPredicted RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 CCDC63Q8NA47 563 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 PDLIM5Q96HC4 596 aaKnown RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 FAM111AQ96PZ2 611 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 CCDC86Q9H6F5 360 aaKnown RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 CNOT10Q9H9A5 744 aaKnown RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 TRNAU1APQ9NX07 287 aaKnown RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 SLC17A7Q9P2U7 560 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 XPR1Q9UBH6 696 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 SLC23A2Q9UGH3 650 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
PFDN6-201ENST00000374606 CDYLQ9Y232 598 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 KCNK6Q9Y257 313 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 PLLPQ9Y342 182 aa17.13■□□□□ 0.33
PFDN6-201ENST00000374606 IGSF10Q6WRI0 2623 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 SMG1Q96Q15 3661 aaKnown RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 H3BM21 787 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 SH3BP5O60239 455 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 PLIN3O60664 434 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 RBP1P09455 135 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 TECRLQ5HYJ1 363 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 ADAMTSL2Q86TH1 951 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 SPATS2Q86XZ4 545 aaKnown RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 FSTL5Q8N475 847 aaPredicted RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 PTERQ96BW5 349 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 CAMK1GQ96NX5 476 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 GPR78Q96P69 363 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 C12orf65Q9H3J6 166 aaKnown RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 DPEP2Q9H4A9 486 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 TFB2MQ9H5Q4 396 aaKnown RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 ALG9Q9H6U8 611 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 DNAJC28Q9NX36 388 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 APOBEC3BQ9UH17 382 aaKnown RBP17.12■□□□□ 0.33
PFDN6-201ENST00000374606 EMCNQ9ULC0 261 aa17.12■□□□□ 0.33
PFDN6-201ENST00000374606 GCN1Q92616 2671 aaKnown RBP17.11■□□□□ 0.33
PFDN6-201ENST00000374606 A0A1B0GVT2 93 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 CCDC189A1A4V9 331 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 CDC7O00311 574 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 PROCP04070 461 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 SLC35G4P0C7Q5 338 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 CTSEP14091 401 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 NME1P15531 152 aaKnown RBP17.11■□□□□ 0.33
PFDN6-201ENST00000374606 IDSP22304 550 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 MAPK9P45984 424 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 ATP1A2P50993 1020 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 ILF3Q12906 894 aaKnown RBP eCLIP17.11■□□□□ 0.33
PFDN6-201ENST00000374606 SP140Q13342 867 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 MPP2Q14168 576 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 TSNQ15631 228 aaKnown RBP17.11■□□□□ 0.33
PFDN6-201ENST00000374606 ZNF542PQ5EBM4 170 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 METRNLQ641Q3 311 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 LVRNQ6Q4G3 990 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 XKR5Q6UX68 686 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 NAXDQ8IW45 347 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 ARMC2Q8NEN0 867 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 MGARPQ8TDB4 240 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 KIAA1191Q96A73 305 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
PFDN6-201ENST00000374606 TMEM168Q9H0V1 697 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 IKZF3Q9UKT9 509 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 ACSL5Q9ULC5 683 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 RNF112Q9ULX5 631 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 PLEKHM1Q9Y4G2 1056 aa17.11■□□□□ 0.33
PFDN6-201ENST00000374606 ZFC3H1O60293 1989 aaKnown RBP17.1■□□□□ 0.33
PFDN6-201ENST00000374606 TK2O00142 265 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 C8GP07360 202 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 CHN1P15882 459 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 JUNDP17535 347 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 PDHA2P29803 388 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 CLCNKAP51800 687 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 CTBSQ01459 385 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 TCEA2Q15560 299 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 HHATQ5VTY9 493 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 FRA10AC1Q70Z53 315 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 ISCA2Q86U28 154 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 RHEBL1Q8TAI7 183 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 STAG3L4Q8TBR4 150 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 MDM1Q8TC05 714 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 RDH11Q8TC12 318 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 EXT2Q93063 718 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 FOPNLQ96NB1 174 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 GSDMCQ9BYG8 508 aa17.1■□□□□ 0.33
PFDN6-201ENST00000374606 OR52A5Q9H2C5 316 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms