RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 EPHB3P54753 998 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 OR4D2P58180 307 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 EPS8Q12929 822 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 RAB33AQ14088 237 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ATXN7L2Q5T6C5 722 aaPredicted RBP13.68□□□□□ -0.22
HMGCL-203ENST00000374490 Q6ZNB5 142 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ARHGAP22Q7Z5H3 698 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 OR52E4Q8NGH9 312 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ITFG1Q8TB96 612 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 FAM110BQ8TC76 370 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CYGBQ8WWM9 190 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 SLC13A3Q8WWT9 602 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 WBP2Q969T9 261 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 TMEM74Q96NL1 305 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CDK15Q96Q40 435 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 EGFL8Q99944 293 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 NTMT1Q9BV86 223 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 CD244Q9BZW8 370 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 ATP13A3Q9H7F0 1226 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 KCTD5Q9NXV2 234 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 INSL6Q9Y581 213 aa13.68□□□□□ -0.22
HMGCL-203ENST00000374490 GLYATL1P3A0A0U1RQE8 302 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 C1orf232A0A0U1RR37 186 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 A0A1B0GTW7 788 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 K7EPI3 171 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 GAPDHSO14556 408 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-203ENST00000374490 FGF18O76093 207 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 PRSS23O95084 383 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 SLC25A14O95258 325 aaPredicted RBP13.67□□□□□ -0.22
HMGCL-203ENST00000374490 ALBP02768 609 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 IL6P05231 212 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 CNPP09543 421 aaKnown RBP13.67□□□□□ -0.22
HMGCL-203ENST00000374490 SLC2A4P14672 509 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 HSPA7P48741 367 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 NUP107P57740 925 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 CHRNB3Q05901 458 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 MPP7Q5T2T1 576 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 USP51Q70EK9 711 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 TRIM46Q7Z4K8 759 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 ITIH5Q86UX2 942 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 TCAIMQ8N3R3 496 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 PAF1Q8N7H5 531 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 HLA-CQ95604 372 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 VPS50Q96JG6 964 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 C17orf80Q9BSJ5 609 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 OSBPL6Q9BZF3 934 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 GORASP2Q9H8Y8 452 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 SMPD4Q9NXE4 827 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 CCL27Q9Y4X3 112 aa13.67□□□□□ -0.22
HMGCL-203ENST00000374490 GSTA4O15217 222 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 TAPBPO15533 448 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 KATNA1O75449 491 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 SCELO95171 688 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 OLFM2O95897 454 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 ALPIP09923 528 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 GNPDA1P46926 289 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 RPL38P63173 70 aaKnown RBP13.66□□□□□ -0.22
HMGCL-203ENST00000374490 ADARB1P78563 741 aaKnown RBP13.66□□□□□ -0.22
HMGCL-203ENST00000374490 HTRA4P83105 476 aaPredicted RBP13.66□□□□□ -0.22
HMGCL-203ENST00000374490 ABRAXAS2Q15018 415 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 KIAA0040Q15053 153 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 CCNYL2Q5T2Q4 361 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 GPRC6AQ5T6X5 926 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 ZDHHC20Q5W0Z9 365 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 CPXM2Q8N436 756 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 ZNF420Q8TAQ5 688 aaPredicted RBP13.66□□□□□ -0.22
HMGCL-203ENST00000374490 AUTS2Q8WXX7 1259 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 SDCCAG3Q96C92 435 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 EID2BQ96D98 161 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 CNDP2Q96KP4 475 aaKnown RBP13.66□□□□□ -0.22
HMGCL-203ENST00000374490 RNF145Q96MT1 663 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 LYSMD1Q96S90 227 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 DPY30Q9C005 99 aa13.66□□□□□ -0.22
HMGCL-203ENST00000374490 NSUN3Q9H649 340 aaKnown RBP13.66□□□□□ -0.22
HMGCL-203ENST00000374490 MUC3AQ02505 3323 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 MANBAO00462 879 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 ULK1O75385 1050 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 TRIM16O95361 564 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 KRT6AP02538 564 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 KRT6BP04259 564 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 EPB42P16452 691 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 NELFEP18615 380 aaKnown RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 SERPINA4P29622 427 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 KRT6CP48668 564 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 ALDH3A2P51648 485 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 YBX1P67809 324 aaKnown RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 CDKN3Q16667 212 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 IMPG1Q17R60 797 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 CYBRD1Q53TN4 286 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 DNAJB7Q7Z6W7 309 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 TCEAL8Q8IYN2 117 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 NXPE1Q8N323 547 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 DTWD1Q8N5C7 304 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 DCBLD1Q8N8Z6 715 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
HMGCL-203ENST00000374490 MAGEE2Q8TD90 523 aaPredicted RBP13.65□□□□□ -0.22
HMGCL-203ENST00000374490 LZICQ8WZA0 190 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms