RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 UFSP2Q9NUQ7 469 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 LSM7Q9UK45 103 aaKnown RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 PCYT1BQ9Y5K3 369 aaPredicted RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 FABP12A6NFH5 140 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 LIPEQ05469 1076 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 PTP4A2Q12974 167 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 IRF5Q13568 498 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 DDX39BQ13838 428 aaKnown RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 WNT8BQ93098 351 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 KLHL5Q96PQ7 755 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 TBCDQ9BTW9 1192 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 A8MU76 341 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 L7N2F9 121 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 TPP1O14773 563 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 EPHA3P29320 983 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 ZNF132P52740 706 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 MLLT6P55198 1093 aaPredicted RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 GRTP1Q5TC63 336 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 KBTBD6Q86V97 674 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 C12orf45Q8N5I9 185 aaPredicted RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 SLC5A11Q8WWX8 675 aa6.49□□□□□ -1.37
CHD6-203ENST00000373233 CELF6Q96J87 481 aaKnown RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 FARSAQ9Y285 508 aaKnown RBP6.49□□□□□ -1.37
CHD6-203ENST00000373233 MYO16Q9Y6X6 1858 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 STX16-NPEPL1H3BU86 382 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 STX16O14662 325 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MBL2P11226 248 aaPredicted RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 CCR1P32246 355 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ZNF404Q494X3 552 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 NDUFAF5Q5TEU4 345 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 NAPEPLDQ6IQ20 393 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 UGT3A1Q6NUS8 523 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 PAPD4Q6PIY7 484 aaKnown RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 SLC24A5Q71RS6 500 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 DCP2Q8IU60 420 aaKnown RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 ZNF347Q96SE7 839 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MCMBPQ9BTE3 642 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 KCNIP3Q9Y2W7 256 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 SLC12A8A0AV02 714 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MOXD2PA6NHM9 499 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 HACD1B0YJ81 288 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 F5H5T6 163 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 TEX46H3BTG2 121 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 DNTTP04053 509 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ALDH2P05091 517 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 PROZP22891 400 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 GRK5P34947 590 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ZNF549Q6P9A3 640 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 NPNTQ6UXI9 565 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 DNAJB7Q7Z6W7 309 aaPredicted RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 PIAS4Q8N2W9 510 aaPredicted RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 ACBD4Q8NC06 268 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 BCL2L14Q9BZR8 327 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 LRRC40Q9H9A6 602 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 EBF1Q9UH73 591 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 SNX4O95219 450 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 RASGRP1O95267 797 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 VNN2O95498 520 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 PAICSP22234 425 aaKnown RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 FAM198BQ6UWH4 519 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 FAM220AQ7Z4H9 259 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 COMTD1Q86VU5 262 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 TRIM48Q8IWZ4 208 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 PGAM4Q8N0Y7 254 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MARVELD2Q8N4S9 558 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 JOSD2Q8TAC2 188 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ERVK-5Q9HDB9 667 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 RIMKLBQ9ULI2 386 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 SLC30A4O14863 429 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 SLC11A2P49281 568 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MECP2P51608 486 aaKnown RBP6.48□□□□□ -1.37
CHD6-203ENST00000373233 FBXW4P57775 412 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 LILRA4P59901 499 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 IKBKEQ14164 716 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 NR6A1Q15406 480 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 PITRM1Q5JRX3 1037 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 SLC15A4Q8N697 577 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 GAL3ST1Q99999 423 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ERVK-6Q9BXR3 956 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 CDHR5Q9HBB8 845 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 WASH6PQ9NQA3 447 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ERVK-18Q9QC07 812 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MGAT4BQ9UQ53 548 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MYADML2A6NDP7 307 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 OR2B3O76000 313 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 CST1P01037 141 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 FCER2P06734 321 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 JUNDP17535 347 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 MTHFRP42898 656 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 FNTBP49356 437 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 HERVK_113P63132 956 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 CLDN10P78369 228 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 TWF1Q12792 350 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ILF3Q12906 894 aaKnown RBP eCLIP6.48□□□□□ -1.371e-6■■■□□ 16.7
CHD6-203ENST00000373233 ZCCHC12Q6PEW1 402 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 RDH11Q8TC12 318 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 GANCQ8TET4 914 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 ZDHHC12Q96GR4 267 aa6.48□□□□□ -1.37
CHD6-203ENST00000373233 KCTD15Q96SI1 283 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms