RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PMM2O15305 246 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SSX4O60224 188 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZBTB11O95625 1053 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 DEFA6Q01524 100 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 HNRNPDQ14103 355 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ADGRF1Q5T601 910 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 GRASPQ7Z6J2 395 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF717Q9BY31 904 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 WDR55Q9H6Y2 383 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ATP6AP2A0A1C7CYW4 349 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ERAL1O75616 437 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 FADS2O95864 444 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 FAM220AQ7Z4H9 259 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 PEG10Q86TG7 708 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 KCTD13Q8WZ19 329 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 RRNAD1Q96FB5 475 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR52E6Q96RD3 313 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 RBM4BQ9BQ04 359 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 RBM4Q9BWF3 364 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 RNF38Q9H0F5 515 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 GKN1Q9NS71 199 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ADGRE2Q9UHX3 823 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 TCAF1Q9Y4C2 921 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 INSL5Q9Y5Q6 135 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ITPKAP23677 461 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 BLKP51451 505 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 TEAD2Q15562 447 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ANXA8L1Q5VT79 327 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 TXNDC8Q6A555 127 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 TCEAL6Q6IPX3 200 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SCIMPQ6UWF3 145 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 FAM131AQ6UXB0 335 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SLC39A5Q6ZMH5 540 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SPPL2CQ8IUH8 684 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 C2orf73Q8N5S3 287 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR2T12Q8NG77 320 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 SPATA22Q8NHS9 363 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 RFKQ969G6 155 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 DZANK1Q9NVP4 752 aa13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZMAT5Q9UDW3 170 aaKnown RBP13.12□□□□□ -0.31
RAPGEF1-201ENST00000372189 RFXANKO14593 260 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 PPEF2O14830 753 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 SUV39H1O43463 412 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HIST1H2ABP04908 130 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 CYP4B1P13584 511 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 DYRK1AQ13627 763 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 PTCHD4Q6ZW05 846 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HIST3H2AQ7L7L0 130 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 LRRC57Q8N9N7 239 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HIST1H2ACQ93077 130 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 AARSD1Q9BTE6 412 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 SCML2Q9UQR0 700 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 NUP188Q5SRE5 1749 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 KLHL33A6NCF5 533 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 KHDRBS3O75525 346 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 CSF2RAP15509 400 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 CMPK1P30085 196 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 MTHFRP42898 656 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 LRRC32Q14392 662 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 LSM12Q3MHD2 195 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 MBLAC2Q68D91 279 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HID1Q8IV36 788 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 NRSN1Q8IZ57 195 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 PARP8Q8N3A8 854 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 C8orf48Q96LL4 319 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 PANX1Q96RD7 426 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 SMPD3Q9NY59 655 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 PLK4O00444 970 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF12P17014 697 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 GPD2P43304 727 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 KHDC1Q4VXA5 237 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 EOGTQ5NDL2 527 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HM13Q8TCT9 377 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 BPIFB1Q8TDL5 484 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 C16orf70Q9BSU1 422 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 CADM1Q9BY67 442 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 TMEM138Q9NPI0 162 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 CBY3A6NI87 242 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 PLOD3O60568 738 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 KDM4BO94953 1096 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HAPLN1P10915 354 aaPredicted RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 IL18R1Q13478 541 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 EML3Q32P44 896 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 OR8H3Q8N146 312 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 CPSF7Q8N684 471 aaKnown RBP13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 HTRA1Q92743 480 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 TDP1Q9NUW8 608 aa13.11□□□□□ -0.31
RAPGEF1-201ENST00000372189 EME2A4GXA9 379 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 CSN2P05814 226 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 CHRNGP07510 517 aa13.1□□□□□ -0.31
RAPGEF1-201ENST00000372189 GPR17Q13304 367 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms