RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 MARCKSL1P49006 195 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 TROAPQ12815 778 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 CTXN3Q4LDR2 81 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 GOLM1Q8NBJ4 401 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 SPATA9Q9BWV2 254 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 NYAP2Q9P242 653 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 GNG13Q9P2W3 67 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 PCDHGB2Q9Y5G2 931 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 TOXO94900 526 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 TESCQ96BS2 214 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 TPST2O60704 377 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 LPOP22079 712 aaPredicted RBP15.03■□□□□ -0
COL5A1-201ENST00000371817 PCSK9Q8NBP7 692 aaKnown RBP15.03■□□□□ -0
COL5A1-201ENST00000371817 GLB1L3Q8NCI6 653 aaPredicted RBP15.03■□□□□ -0
COL5A1-201ENST00000371817 KCNC2Q96PR1 638 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 NR2E1Q9Y466 385 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 TNS3Q68CZ2 1445 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 NT5C1B-RDH14C9J2C7 533 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 C19orf81C9J6K1 198 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 KERAO60938 352 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 CLDN9O95484 217 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 CYP17A1P05093 508 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 RAP1GAP2Q684P5 730 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 RD3Q7Z3Z2 195 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 CPNE9Q8IYJ1 553 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 GIMAP5Q96F15 307 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 SH2B3Q9UQQ2 575 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 A0A1W2PRQ8 180 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 MAGEB17A8MXT2 336 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 PRKCHP24723 683 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 AKT2P31751 481 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 SPIN3Q5JUX0 258 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 ZNF484Q5JVG2 852 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 NKAPLQ5M9Q1 402 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 C7orf34Q96L11 122 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 NANSQ9NR45 359 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 ZNF70Q9UC06 446 aaPredicted RBP15.03■□□□□ -0
COL5A1-201ENST00000371817 AQP12BA6NM10 295 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 LRRN3E7EW58 273 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 NEDD8-MDP1E9PL57 170 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 INMT-MINDY4F8WBC2 141 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 GCATO75600 419 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 LATS1O95835 1130 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 C2P06681 752 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 CAP2P40123 477 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 PPP5CP53041 499 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 PTGR1Q14914 329 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 ZC3HC1Q86WB0 502 aaKnown RBP15.03■□□□□ -0
COL5A1-201ENST00000371817 AQP12AQ8IXF9 295 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 FAM71AQ8IYT1 594 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 LRRN3Q9H3W5 708 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 FOLH1BQ9HBA9 442 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 SLAIN2Q9P270 581 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 SLC7A8Q9UHI5 535 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 FBXO10Q9UK96 956 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 PCDHGA8Q9Y5G5 932 aa15.03■□□□□ -0
COL5A1-201ENST00000371817 LRRC37A5PQ49AS3 106 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 IFI44LQ53G44 452 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 IL23RQ5VWK5 629 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 PAPD4Q6PIY7 484 aaKnown RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 ANKRD13BQ86YJ7 626 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 DEFB106AQ8N104 65 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 GALNT11Q8NCW6 608 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 DPCDQ9BVM2 203 aaPredicted RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 ELOVL4Q9GZR5 314 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 MTG2Q9H4K7 406 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 ATP13A3Q9H7F0 1226 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 ATXN7L3Q14CW9 347 aaPredicted RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 CBY1Q9Y3M2 126 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 DIDO1Q9BTC0 2240 aaKnown RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 ZNF878C9JN71 531 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 TFPIP10646 304 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 ZNF674Q2M3X9 581 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 ATXN7L2Q5T6C5 722 aaPredicted RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 ENAMQ9NRM1 1142 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 ADAMTS12P58397 1594 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 TDGQ13569 410 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 PPP1R26Q5T8A7 1209 aaPredicted RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 LURAP1Q96LR2 239 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 PPIL3Q9H2H8 161 aaKnown RBP15.02■□□□□ -0
COL5A1-201ENST00000371817 SMURF1Q9HCE7 757 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 TIGARQ9NQ88 270 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 TVP23BQ9NYZ1 205 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 SPG21Q9NZD8 308 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 MGAT4CQ9UBM8 478 aa15.02■□□□□ -0
COL5A1-201ENST00000371817 ARHGEF5Q12774 1597 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 TCEA1P23193 301 aaKnown RBP15.02□□□□□ -0.01
COL5A1-201ENST00000371817 LAMTOR4Q0VGL1 99 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 SEC23BQ15437 767 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 Q8N402 240 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 WNT8BQ93098 351 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 BEX2Q9BXY8 128 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 SMAD9O15198 467 aaKnown RBP15.02□□□□□ -0.01
COL5A1-201ENST00000371817 LGI2Q8N0V4 545 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 SLC2A14Q8TDB8 520 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 DEDD2Q8WXF8 326 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 ELMO3Q96BJ8 720 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 TLCD1Q96CP7 247 aa15.02□□□□□ -0.01
COL5A1-201ENST00000371817 POLR2J3Q9H1A7 115 aaKnown RBP15.02□□□□□ -0.01
COL5A1-201ENST00000371817 MROH8Q9H579 483 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms